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          • Home
          • › Search Tool
          • › Search Results
          • › Cf02688763_g1
          See other HMGB1 GE Assays ›
          Gene Symbol:
          HMGB1
          Gene Name:
          high mobility group box 1
          Gene Aliases:
          HMG1
          Chromosome Location:
          Chr.25: 9431223 - 9558167 on Build CanFam3.1
          Species:
          Dog
          Species Specific ID (Flybase ID):
          -
          Assay ID Cf02688763_g1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
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          • Genomic Map
          • Assay Details
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          Genomic Map

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          Assay Details

          Gene Symbol: HMGB1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001002937.2 NP_001002937.1 320 125
          XM_022409535.1 XP_022265243.1 327 125
          GenBank mRNA AY135519.1 - 242 125
          DN349572.1 - 2 320 125

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          More Information


          Additional Information:

          This assay maps with 100% identity to the human homologue, and the human gene symbol was added in the Alias field to assist with searches.

          Set Membership:

          Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Recommended Assay Canis familiaris Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          inflammatory response to antigenic stimulus
          regulation of tolerance induction
          regulation of T cell mediated immune response to tumor cell
          autophagy
          positive regulation of cytosolic calcium ion concentration
          negative regulation of RNA polymerase II transcription preinitiation complex assembly
          regulation of restriction endodeoxyribonuclease activity
          DNA geometric change
          positive regulation of mismatch repair
          tumor necrosis factor production
          negative regulation of interferon-gamma production
          positive regulation of interleukin-10 production
          positive regulation of interleukin-12 production
          positive regulation of interleukin-8 production
          V(D)J recombination
          positive regulation of toll-like receptor 9 signaling pathway
          T-helper 1 cell activation
          positive regulation of activated T cell proliferation
          apoptotic cell clearance
          positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
          negative regulation of CD4-positive, alpha-beta T cell differentiation
          positive regulation of DNA binding
          positive regulation of blood vessel endothelial cell migration
          negative regulation of blood vessel endothelial cell migration
          T-helper 1 cell differentiation
          innate immune response
          positive regulation of JNK cascade
          DNA ligation involved in DNA repair
          positive regulation of DNA ligation
          positive regulation of monocyte chemotaxis
          neutrophil clearance
          positive regulation of vascular endothelial cell proliferation
          positive regulation of chemokine (C-X-C motif) ligand 2 production
          negative regulation of apoptotic cell clearance
          positive regulation of dendritic cell differentiation
          four-way junction DNA binding
          bubble DNA binding
          lipopolysaccharide binding
          phosphatidylserine binding
          damaged DNA binding
          transcription coactivator activity
          integrin binding
          DNA binding, bending
          lyase activity
          C-X-C chemokine binding
          non-sequence-specific DNA binding, bending
          DNA polymerase binding
          supercoiled DNA binding
          DNA-binding transcription factor binding

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