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- Gene Symbol:
-
AGPAT4-IT1 - Gene Name:
- AGPAT4 intronic transcript 1
- Gene Aliases:
- C6orf59, NCRNA00241
- Chromosome Location:
- Chr.6: 161160114 - 161161982 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: AGPAT4-IT1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_024277.1 | 1 | 702 | 69 | ||
| GenBank mRNA | AK026765.1 | - | 1 | 711 | 69 | |
| AL136708.1 | - | 1 | 556 | 69 | ||
| BC101668.1 | - | 1 | 178 | 69 | ||
| BC112291.1 | - | 1 | 178 | 69 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0600013797.hg.1This assay targets the same location as HTA transcript cluster(s) TC06002285.hg.1
Set Membership: |
Amplicon length less than or equal to 70
Mammalian Gene Collection
Detect Genomic DNA
Recommended Assay
Homo sapiens
1700
Inventoried
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_23_P70359 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_23_P70359 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 17146 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 18604 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_23_P70359 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_23_P70359 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215138 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215129 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215136 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215131 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215157 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420231 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215169 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215166 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215165 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215177 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215135 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420203 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420189 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420210 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215111 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420177 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215180 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215150 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215125 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215175 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215182 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215173 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215118 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420218 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420198 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420202 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215158 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215149 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420234 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215139 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420219 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215133 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215171 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215135 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420231 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215131 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420210 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215149 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420218 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215180 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420203 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215133 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215171 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215129 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215177 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215118 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215182 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215125 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420198 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215158 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215150 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215157 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420189 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215175 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215166 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215138 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420177 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215165 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215111 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420202 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420219 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215173 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215136 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215169 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25420234 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05215139 | - | - |
| Whole Human Genome Oligo Microarray G4112A | A_23_P70359 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_23_P70359 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215142 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215111 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215132 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215137 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215162 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215150 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215139 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215129 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215169 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215157 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215146 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215184 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215165 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215109 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215121 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215115 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215176 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215159 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215153 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215133 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215136 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215113 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215118 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215178 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215155 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215175 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215180 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215125 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215183 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215173 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215123 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05215167 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | 8130644 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8130643 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8130642 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8130641 | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 223740_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0600013797.hg.1 | ENST00000624499.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600013797.hg.1 | NR_024277.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06028715.hg.1 | NR_024277.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06028715.hg.1 | TC06002285.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC0600013797.hg.1 | ENST00000624499.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600013797.hg.1 | NR_024277.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600195201.hg.1 | ENST00000624499.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600195201.hg.1 | NR_024277.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600195201.hg.1 | TC0600013797.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0600195201.hg.1 | NR_024277.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600195201.hg.1 | ENST00000624499.1 | Ensembl |
| Human Genome U133 Plus 2.0 Array | 223740_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 223740_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 223740_at3 | - | - |
| Human Genome U95 Set | 71617_at | - | - |
| Human Genome U95 Set | 71617_PM_at | - | - |
| Human Genome U133 Set | 223740_at | - | - |
| Human Genome U133 Set | 223740_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A030787 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A030787 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 144531 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3241996 | NR_024277.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3241996 | AK026765.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3241996 | NR_024277.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3241996 | AK026765.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3241996 | NR_024277.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3241996 | AK026765.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3241996 | NR_024277.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3241996 | AK026765.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| Illumina humanRef-8 v2.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina humanRef-8 v2.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina humanRef-8 v2.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| Illumina HumanRef-8 v3.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina HumanRef-8 v3.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina HumanRef-8 v3.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1655572 | AL136708.1 | human_transcriptome |
| Illumina HumanRef-8 WG-DASL v3.0 | ILMN_1655572 | NR_024277.1 | human_transcriptome |
| Illumina HumanRef-8 WG-DASL v3.0 | ILMN_1655572 | AK026765.1 | human_transcriptome |
| Illumina HumanRef-8 WG-DASL v3.0 | ILMN_1655572 | AL136708.1 | human_transcriptome |
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