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- Gene Symbol:
-
SMCR5 - Gene Name:
- Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
- Gene Aliases:
- NCRNA00034
- Chromosome Location:
- Chr.17: 17776686 - 17779529 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: SMCR5 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_024007.1 | 1 | 54 | 83 | ||
| GenBank mRNA | AF467442.1 | - | 1 | 54 | 83 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1700009948.hg.1This assay targets the same location as HTA transcript cluster(s) TC17001191.hg.1
Additional Information:
This assay is in the 5'UTR region of the AF467442.1 transcripts.
Set Membership: |
Amplicon length between 71 and 85
Detect Genomic DNA
Recommended Assay
Homo sapiens
1700
Inventoried
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3294679 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_23_P388798 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 35714 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 4067 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3294679 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3294679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811007 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256487 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811019 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256502 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811006 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256496 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811028 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256515 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256500 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256479 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256510 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256508 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256499 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951312 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810984 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951277 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951315 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256530 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256490 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951305 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256524 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256506 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256486 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810968 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256518 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256477 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256488 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951273 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951308 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256528 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810992 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810953 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256514 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256501 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256511 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256507 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256476 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256484 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810949 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951299 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256531 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256497 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256505 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256512 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256480 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256493 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811009 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810984 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256501 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951277 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256506 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256486 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256488 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256512 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811019 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256484 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811006 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811007 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256493 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256528 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951315 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256514 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256507 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256505 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256508 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256530 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256499 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810949 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256502 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810953 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256531 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256500 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256511 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256496 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256497 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810992 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951305 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30810968 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256515 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951299 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951312 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951273 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256518 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256524 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256487 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256476 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256479 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951308 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256480 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256490 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811028 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16951310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256510 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30811009 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10256477 | - | - |
| Whole Human Genome Oligo Microarray G4112A | A_23_P388798 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_23_P388798 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256482 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256528 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256497 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256488 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256530 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951296 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256499 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951294 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256500 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951313 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951311 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951279 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256492 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951305 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256520 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256496 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951308 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256508 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256532 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256479 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256512 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951278 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256503 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256506 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256477 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256504 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256501 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256480 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951277 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256494 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256523 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951272 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256490 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256505 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951299 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256476 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951288 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16951315 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256514 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256524 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256502 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256518 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10256515 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | 8013132 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8013134 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8013133 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8013131 | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 1553020_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11750649_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11750649_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR17016189.hg.1 | ENST00000543475.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17016189.hg.1 | NR_024007.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17016189.hg.1 | TC17001191.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1700009948.hg.1 | ENST00000543475.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700009948.hg.1 | NR_024007.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007089.hg.1 | ENST00000583598.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700007089.hg.1 | ENST00000583598.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700177749.hg.1 | ENST00000543475.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700177749.hg.1 | NR_024007.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700177749.hg.1 | TC1700009948.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700177749.hg.1 | NR_024007.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700177749.hg.1 | ENST00000543475.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700009948.hg.1 | ENST00000543475.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700009948.hg.1 | NR_024007.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700007089.hg.1 | ENST00000583598.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700007089.hg.1 | ENST00000583598.1 | Ensembl |
| Human Genome U133 Plus 2.0 Array | 1553020_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1553020_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1553020_at4 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008013 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008013 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 218381 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3240236 | NR_024007.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3240236 | AF467442.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3240236 | NR_024007.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3240236 | AF467442.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3240236 | NR_024007.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3240236 | AF467442.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3240236 | NR_024007.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3240236 | AF467442.1 | human_transcriptome |
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