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          • Home
          • › Search Tool
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          • › Hs00427620_m1
          See other TBP GE Assays ›
          Gene Symbol:
          TBP
          Gene Name:
          TATA-box binding protein
          Gene Aliases:
          GTF2D, GTF2D1, HDL4, SCA17, TFIID
          Chromosome Location:
          Chr.6: 170554333 - 170572870 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          Assay ID Hs00427620_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information
          • Citations (25)

          Genomic Map

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          Assay Details

          Gene Symbol: TBP
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001172085.1 NP_001165556.1 2 - 3 578 91
          NM_003194.4 NP_003185.1 3 - 4 780 91
          GenBank mRNA AK304648.1 - 2 - 3 565 91
          AK315222.1 - 3 - 4 743 91
          BC109053.1 - 3 - 4 691 40032492 91
          BC109054.1 - 4 - 5 545 40032493 91
          BC110341.1 - 3 - 4 739 5761426 91
          BT019657.1 - 2 - 3 492 91
          CR456776.1 - 2 - 3 501 91
          M34960.1 - 2 - 3 501 91
          M55654.1 - 3 - 4 742 91
          X54993.1 - 2 - 3 587 91
          Z22828.1 - 3 - 4 739 91

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          More Information


          Updated Mapping Information

          This assay targets the same location as Clariom D transcript cluster(s) TC0600010343.hg.1
          This assay targets the same location as HTA transcript cluster(s) TC06001201.hg.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Endogenous Controls Recommended Assay Homo sapiens Human Transcription Factors (non-Hox) Inventoried Human_Transcription_Factors_(non-Hox) Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene TBP

          Panther Classification:

          Molecular Function -

          general transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          transcription initiation from RNA polymerase I promoter
          transcription elongation from RNA polymerase I promoter
          termination of RNA polymerase I transcription
          transcription from RNA polymerase II promoter
          transcription initiation from RNA polymerase II promoter
          transcription elongation from RNA polymerase II promoter
          transcription from RNA polymerase III promoter
          spermatogenesis
          viral process
          snRNA transcription from RNA polymerase II promoter
          positive regulation of gene expression, epigenetic
          positive regulation of transcription, DNA-templated
          regulation of signal transduction by p53 class mediator
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          RNA polymerase II core promoter sequence-specific DNA binding
          RNA polymerase II repressing transcription factor binding
          transcription factor activity, sequence-specific DNA binding
          protein binding
          transcription factor binding
          enzyme binding
          transcription regulatory region DNA binding
          repressing transcription factor binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000230354.10 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000392092.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000421512.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000423353.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000446829.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000446829.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000446829.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000446829.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000446829.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000540980.5 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 ENST00000616883.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_001172085.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 TC0600010343.hg.1 NM_003194.4 Refseq

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          Citations (25)

          Resveratrol reduces endothelial oxidative stress by modulating the gene expression of superoxide dismutase 1 (SOD1), glutathione peroxidase 1 (GPx1) and NADPH oxidase subunit (Nox4).
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          Journal
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          PFKFB3 gene silencing decreases glycolysis, induces cell-cycle delay and inhibits anchorage-independent growth in HeLa cells.
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          Calvo MN, Bartrons R, Castano E, Perales JC, Navarro-Sabate A, Manzano A
          Journal
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          Switches in 6-phosphofructo-2-kinase isoenzyme expression during rat sperm maturation.
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          Gomez M, Navarro-Sabate A, Manzano A, Duran J, Obach M, Bartrons R
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          Biochem Biophys Res Commun - Page No 330 (Fri Sep 18 00:00:00 EDT 2009)
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          Differential expression profiling analyses identifies downregulation of 1p, 6q, and 14q genes and overexpression of 6p histone cluster 1 genes as markers of recurrence in meningiomas.
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          Perez-Magan E, Rodriguez de Lope A, Ribalta T, Ruano Y, Campos-Martin Y, Perez-Bautista G, Garcia JF, Garcia-Claver A, Fiano C, Hernandez-Moneo JL, Mollejo M, Melendez B
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          Comparison of siRNA-induced off-target RNA and protein effects.
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          Aleman LM, Doench J, Sharp PA
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          Detection of survivin mRNA in healthy oral mucosa, oral leucoplakia and oral cancer.
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          Lodi G, Franchini R, Bez C, Sardella A, Moneghini L, Pellegrini C, Bosari S, Manfredi M, Vescovi P, Carrassi A
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          Tissue-specific alternative promoters of the serotonin receptor gene HTR3B in human brain and intestine.
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          Human placental adenosine receptor expression is elevated in preeclampsia and hypoxia increases expression of the A2A receptor.
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          von Versen-Hoynck F, Rajakumar A, Bainbridge SA, Gallaher MJ, Roberts JM, Powers RW
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          Intra-abdominal fat adiponectin receptors expression and cardiovascular metabolic risk factors in obesity and diabetes.
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          STAT6 activity is regulated by SOCS-1 and modulates BCL-XL expression in primary mediastinal B-cell lymphoma.
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          Leukemia - Page No 2106 (Sat Nov 01 00:00:00 EDT 2008)
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          Pseudohypoparathyroidism and GNAS epigenetic defects: clinical evaluation of albright hereditary osteodystrophy and molecular analysis in 40 patients.
          Authors
          Mantovani G, de Sanctis L, Barbieri AM, Elli FM, Bollati V, Vaira V, Labarile P, Bondioni S, Peverelli E, Lania AG, Beck-Peccoz P, Spada A
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          J Clin Endocrinol Metab - Page No 651 (Mon Feb 01 00:00:00 EST 2010)
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          Validation of adequate endogenous reference genes for the normalisation of qPCR gene expression data in human post mortem tissue.
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          Koppelkamm A, Vennemann B, Fracasso T, Lutz-Bonengel S, Schmidt U, Heinrich M
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          Int J Legal Med - Page No 371 (Wed Sep 01 00:00:00 EDT 2010)
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          Gene signatures of pulmonary metastases of renal cell carcinoma reflect the disease-free interval and the number of metastases per patient.
          Authors
          Wuttig D, Baier B, Fuessel S, Meinhardt M, Herr A, Hoefling C, Toma M, Grimm MO, Meye A, Rolle A, Wirth MP
          Journal
          Int J Cancer - Page No 474 (Wed Jul 15 00:00:00 EDT 2009)
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          125 (2009)
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          9 (2009)
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          Xu H, Czerwinski P, Hortmann M, Sohn HY, Forstermann U, Li H
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          Volume (Year)
          10 (2010)
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