Assay Details

Gene Symbol: GDNF
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000514.3	NP_000505.1	3	3651		89
	NM_001190468.1	NP_001177397.1	3	3671		89
	NM_001190469.1	NP_001177398.1	3	3593		89
	NM_001278098.1	NP_001265027.1	3	3479		89
	NM_199231.2	NP_954701.1	3	3496		89
GenBank mRNA	BC008580.1	-	1	1257		87

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI005480.1	-	1		Chr. 5 - 37812715 - 37812941 [+] on Build GRCh38	89
GenBankmRNA	AA194805.1	-	1		Chr. 5 - 37812677 - 37813171 [+] on Build GRCh38	87
GenBankmRNA	DB297648.1	-	1		Chr. 5 - 37812670 - 37813199 [+] on Build GRCh38	89
GenBankmRNA	BX116877.1	-	1	438	Chr. 5 - 37812679 - 37813273 [-] on Build GRCh38	87
GenBankmRNA	AI768191.1	-	1		Chr. 5 - 37812679 - 37813190 [+] on Build GRCh38	87
GenBankmRNA	AW296078.1	-	1		Chr. 5 - 37812677 - 37813190 [+] on Build GRCh38	87
GenBankmRNA	AA253179.1	-	1		Chr. 5 - 37812708 - 37812907 [+] on Build GRCh38	87
GenBankmRNA	AI087343.1	-	1		Chr. 5 - 37812678 - 37813091 [+] on Build GRCh38	87
GenBankmRNA	AI039134.1	-	1		Chr. 5 - 37812678 - 37813077 [+] on Build GRCh38	89
GenBankmRNA	AI218255.1	-	1		Chr. 5 - 37812715 - 37812941 [+] on Build GRCh38	89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	WD repeat domain 70	WDR70		-60.0kb	Anti-sense	Chr. 5 - 37379280 - 37752672 on NCBI Build GRCh38
Downstream	GDNF antisense RNA 1 (head to head)	GDNF-AS1	GDNFOS	24.3kb	Anti-sense	Chr. 5 - 37840028 - 37875799 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500010523.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GDNF

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	TC0500010523.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500173354.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000326524.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000344622.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000381826.8	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000427982.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000502572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000510177.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000515058.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	ENST00000620847.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_000514.3	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190468.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001190469.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_001278098.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq
Affymetrix Human Clariom D Assay	TC0500010523.hg.1	NM_199231.2	Refseq

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Catalog #	4426961
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Genomic Map