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Gene Symbol:
ATG13
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs00931696_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: ATG13
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001205121.1 NP_001192050.1 2 - 3 672 87
XM_005253263.2 XP_005253320.1 2 - 3 708 87
XM_005253266.2 XP_005253323.1 2 - 3 643 87
XM_017018604.1 XP_016874093.1 2 - 3 708 87
XM_017018606.1 XP_016874095.1 2 - 3 643 87
XM_017018609.1 XP_016874098.1 2 - 3 708 87
XM_017018611.1 XP_016874100.1 2 - 3 643 87
XM_017018613.1 XP_016874102.1 2 - 3 708 87
XM_017018620.1 XP_016874109.1 2 - 3 708 87
GenBank mRNA AK023867.1 - 2 - 3 410 87
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA460696.1 - 2 - 3 451 Chr. 11 - 46617563 - 46645389 [+] on Build GRCh38 87
GenBankmRNA DA722084.1 - 2 - 3 371 Chr. 11 - 46617578 - 46645427 [+] on Build GRCh38 87
GenBankmRNA DA332012.1 - 2 - 3 460 Chr. 11 - 46617553 - 46645408 [+] on Build GRCh38 87
GenBankmRNA DA340281.1 - 2 - 3 483 Chr. 11 - 46617529 - 46645357 [+] on Build GRCh38 87
GenBankmRNA HY070650.1 - 2 - 3 446 Chr. 11 - 46617568 - 46644339 [+] on Build GRCh38 87
GenBankmRNA DA806258.1 - 2 - 3 370 Chr. 11 - 46617578 - 46645903 [+] on Build GRCh38 87
GenBankmRNA DA802976.1 - 2 - 3 421 Chr. 11 - 46617527 - 46645393 [+] on Build GRCh38 87
GenBankmRNA DR157423.1 - 2 - 3 345 Chr. 11 - 46617603 - 46650296 [+] on Build GRCh38 87
GenBankmRNA DA221990.1 - 2 - 3 456 Chr. 11 - 46617558 - 46645375 [+] on Build GRCh38 87
GenBankmRNA DA496749.1 - 2 - 3 414 Chr. 11 - 46617534 - 46645413 [+] on Build GRCh38 87
GenBankmRNA DB222289.1 - 2 - 3 450 Chr. 11 - 46617564 - 46645375 [+] on Build GRCh38 87
GenBankmRNA DB066802.1 - 2 - 3 456 Chr. 11 - 46617558 - 46645372 [+] on Build GRCh38 87
GenBankmRNA DA338553.1 - 2 - 3 450 Chr. 11 - 46617563 - 46645391 [+] on Build GRCh38 87
GenBankmRNA DA461087.1 - 2 - 3 480 Chr. 11 - 46617533 - 46644360 [+] on Build GRCh38 87
GenBankmRNA DB124303.1 - 2 - 3 417 Chr. 11 - 46617541 - 46645401 [+] on Build GRCh38 87
GenBankmRNA DA313316.1 - 2 - 3 391 Chr. 11 - 46617557 - 46645410 [+] on Build GRCh38 87
GenBankmRNA DA108031.1 - 2 - 3 439 Chr. 11 - 46617574 - 46645364 [+] on Build GRCh38 87
GenBankmRNA DA051497.1 - 2 - 3 552 Chr. 11 - 46617463 - 46644321 [+] on Build GRCh38 87
GenBankmRNA DA517728.1 - 2 - 3 436 Chr. 11 - 46617578 - 46645358 [+] on Build GRCh38 87
GenBankmRNA DA501913.1 - 2 - 3 436 Chr. 11 - 46617578 - 46645382 [+] on Build GRCh38 87
GenBankmRNA DB237506.1 - 2 - 3 456 Chr. 11 - 46617557 - 46645370 [+] on Build GRCh38 87
GenBankmRNA DB027958.1 - 2 - 3 375 Chr. 11 - 46617573 - 46645411 [+] on Build GRCh38 87
GenBankmRNA DA509923.1 - 2 - 3 445 Chr. 11 - 46617568 - 46645397 [+] on Build GRCh38 87
GenBankmRNA DA722817.1 - 2 - 3 429 Chr. 11 - 46617584 - 46645378 [+] on Build GRCh38 87
GenBankmRNA BG328485.1 - 2 - 3 437 Chr. 11 - 46617577 - 46644352 [+] on Build GRCh38 87
GenBankmRNA DA721396.1 - 2 - 3 456 Chr. 11 - 46617558 - 46644360 [+] on Build GRCh38 87
GenBankmRNA DA437206.1 - 2 - 3 170 Chr. 11 - 46618108 - 46650285 [+] on Build GRCh38 87
GenBankmRNA DA839645.1 - 2 - 3 450 Chr. 11 - 46617563 - 46645369 [+] on Build GRCh38 87
GenBankmRNA DA552922.1 - 2 - 3 414 Chr. 11 - 46617536 - 46645407 [+] on Build GRCh38 87
GenBankmRNA DA173043.1 - 2 - 3 372 Chr. 11 - 46617579 - 46645909 [+] on Build GRCh38 87
GenBankmRNA DA221138.1 - 2 - 3 450 Chr. 11 - 46617563 - 46645355 [+] on Build GRCh38 87
GenBankmRNA DA110065.1 - 2 - 3 381 Chr. 11 - 46617568 - 46645421 [+] on Build GRCh38 87
GenBankmRNA DA698855.1 - 2 - 3 269 Chr. 11 - 46617679 - 46645958 [+] on Build GRCh38 87
GenBankmRNA DA221533.1 - 2 - 3 389 Chr. 11 - 46617559 - 46645419 [+] on Build GRCh38 87
GenBankmRNA DA499208.1 - 2 - 3 456 Chr. 11 - 46617557 - 46645385 [+] on Build GRCh38 87
GenBankmRNA AU141209.1 - 2 - 3 410 Chr. 11 - 46617541 - 46650282 [+] on Build GRCh38 87
GenBankmRNA BX342671.2 - 2 - 3 436 Chr. 11 - 46617577 - 46649185 [+] on Build GRCh38 87
GenBankmRNA DB070273.1 - 2 - 3 450 Chr. 11 - 46617563 - 46645371 [+] on Build GRCh38 87
GenBankmRNA DA454484.1 - 2 - 3 381 Chr. 11 - 46617568 - 46645905 [+] on Build GRCh38 87
GenBankmRNA DA995726.1 - 2 - 3 457 Chr. 11 - 46617557 - 46645359 [+] on Build GRCh38 87
GenBankmRNA DA115237.1 - 2 - 3 421 Chr. 11 - 46617527 - 46645373 [+] on Build GRCh38 87
GenBankmRNA DA234429.1 - 2 - 3 395 Chr. 11 - 46617553 - 46645899 [+] on Build GRCh38 87
GenBankmRNA DB171711.1 - 2 - 3 384 Chr. 11 - 46617564 - 46645401 [+] on Build GRCh38 87
GenBankmRNA DB016340.1 - 2 - 3 458 Chr. 11 - 46617558 - 46645367 [+] on Build GRCh38 87
GenBankmRNA DB056239.1 - 2 - 3 458 Chr. 11 - 46617563 - 46645370 [+] on Build GRCh38 87
GenBankmRNA DA110313.1 - 2 - 3 458 Chr. 11 - 46617557 - 46645364 [+] on Build GRCh38 87
GenBankmRNA DA393384.1 - 2 - 3 364 Chr. 11 - 46617586 - 46645926 [+] on Build GRCh38 87

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream harbinger transposase derived 1 HARBI1 C11orf77 -431.0 Anti-sense Chr. 11 - 46603027 - 46617651 on NCBI Build GRCh38
Downstream Rho GTPase activating protein 1 ARHGAP1 CDC42GAP,
RHOGAP,
RHOGAP1,
p50rhoGAP 		32.7kb Anti-sense Chr. 11 - 46677075 - 46700665 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100007457.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11000399.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK023867.1, NM_001205121.1, XM_005253263.2, XM_005253266.2, XM_017018604.1, XM_017018606.1, XM_017018609.1, XM_017018611.1, XM_017018613.1, XM_017018620.1 transcripts.

Set Membership:

 Amplicon length between 86 and 100 Homo sapiens Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix


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