Assay Details

Gene Symbol: PGBD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001184743.1	NP_001171672.1	2 - 3	836		73
	NM_032507.3	NP_115896.1	2 - 3	816		73
	XM_006715228.2	XP_006715291.1	1 - 2	493		73
	XM_011514944.2	XP_011513246.1	1 - 2	493		73
	XM_017011361.1	XP_016866850.1	1 - 2	493		73
	XM_017011362.1	XP_016866851.1	2 - 3	609		73
	XM_017011363.1	XP_016866852.1	2 - 3	792		73
GenBank mRNA	AK223446.1	-	2 - 3	801		73
	AK291228.1	-	2 - 3	781		73
	BC032507.1	-	2 - 3	766		73
	BC069033.1	-	2 - 3	662		73
	BC128585.1	-	2 - 3	663	40128523	73
	D88259.1	-	1 - 2	396		73

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600014089.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000282.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_006715228.2, XM_011514944.2, XM_017011362.1, XM_017011363.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PGBD1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06002352.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06002352.hg.1	ENST00000405948.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06002352.hg.1	NM_001184743.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06002352.hg.1	NM_032507.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06002352.hg.1	TC06000282.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	TC0600014089.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600197835.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	ENST00000259883.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_001184743.1	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq
Affymetrix Human Clariom D Assay	TC0600014089.hg.1	NM_032507.3	Refseq

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Catalog #	4351372
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Genomic Map