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          • Home
          • › Search Tool
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          • › Hs00997501_m1
          See other ATRX GE Assays ›
          Gene Symbol:
          ATRX
          Gene Name:
          ATRX, chromatin remodeler
          Gene Aliases:
          ATR2, JMS, MRX52, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX
          Chromosome Location:
          Chr.X: 77504878 - 77786269 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          Assay ID Hs00997501_m1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: ATRX
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_000489.4 NP_000480.3 10 - 11 4070 117
          NM_138270.3 NP_612114.2 9 - 10 3956 117
          XM_005262153.4 XP_005262210.2 10 - 11 4067 117
          XM_005262154.4 XP_005262211.2 11 - 12 3983 117
          XM_005262155.4 XP_005262212.2 10 - 11 4171 117
          XM_005262156.4 XP_005262213.2 9 - 10 3923 117
          XM_005262157.4 XP_005262214.2 10 - 11 3866 117
          XM_006724666.3 XP_006724729.1 9 - 10 3953 117
          XM_006724667.3 XP_006724730.1 8 - 9 3809 117
          XM_006724668.2 XP_006724731.1 10 - 11 4070 117
          XM_017029601.1 XP_016885090.1 11 - 12 3980 117
          XM_017029602.1 XP_016885091.1 10 - 11 4151 117
          XM_017029603.1 XP_016885092.1 9 - 10 3920 117
          XM_017029604.1 XP_016885093.1 10 - 11 3869 117
          XM_017029605.1 XP_016885094.1 11 - 12 4084 117
          XM_017029606.1 XP_016885095.1 9 - 10 4057 117
          XM_017029607.1 XP_016885096.1 9 - 10 4054 117
          XM_017029608.1 XP_016885097.1 8 - 9 3806 117
          XM_017029609.1 XP_016885098.1 10 - 11 3970 117
          XM_017029610.1 XP_016885099.1 10 - 11 3967 117
          XM_017029611.1 XP_016885100.1 9 - 10 3722 117
          GenBank mRNA AB102641.1 - 10 - 11 3802 117
          AB208928.1 - 10 - 11 3797 117
          AB209545.1 - 2 - 3 1695 117
          AK293241.1 - 2 - 3 1336 117
          U09820.1 - 2 - 3 1278 117
          U72936.2 - 11 - 12 4139 117
          U72937.2 - 10 - 11 4017 117
          U72938.2 - 9 - 10 3903 117

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          More Information


          Updated Mapping Information

          This assay targets the same location as Clariom D transcript cluster(s) TC0X00010126.hg.1
          This assay targets the same location as HTA transcript cluster(s) TC0X001173.hg.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Homo sapiens Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene ATRX

          Gene Ontology Categories:

          Function(s) Process(es)

          DNA repair
          DNA methylation
          DNA recombination
          nucleosome assembly
          DNA replication-independent nucleosome assembly
          chromatin remodeling
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          spermatogenesis
          positive regulation of nuclear cell cycle DNA replication
          DNA damage response, signal transduction by p53 class mediator
          forebrain development
          replication fork processing
          positive regulation of telomere maintenance
          DNA duplex unwinding
          post-embryonic forelimb morphogenesis
          multicellular organism growth
          positive regulation of transcription by RNA polymerase II
          Sertoli cell development
          protein localization to chromosome, telomeric region
          seminiferous tubule development
          cellular response to hydroxyurea
          regulation of histone H3-K9 trimethylation
          negative regulation of telomeric RNA transcription from RNA pol II promoter
          positive regulation of telomeric RNA transcription from RNA pol II promoter
          negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
          DNA binding
          DNA helicase activity
          chromatin binding
          helicase activity
          protein binding
          ATP binding
          DNA translocase activity
          methylated histone binding
          histone binding
          metal ion binding
          chromo shadow domain binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 ENST00000373344.4 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 ENST00000395603.3 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 ENST00000400862.3 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 ENST00000480283.1 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 NM_000489.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 NM_138270.3 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR0X015782.hg.1 TC0X001173.hg.1 HTA TC
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000373344.9 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000395603.7 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000480283.5 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000624166.3 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 NM_000489.4 Refseq
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 NM_138270.3 Refseq
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 TC0X00010126.hg.1 Clariom D TC
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000480283.5 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000373344.9 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000395603.7 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 ENST00000624166.3 Ensembl
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 NM_000489.4 Refseq
          Affymetrix Human Clariom D Assay PSR0X00169124.hg.1 NM_138270.3 Refseq

          Back To Top

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