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See other FAM166A GE Assays ›
Gene Symbol:
FAM166A C9orf173-AS1
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs01008618_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: FAM166A
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq XM_006717108.2 XP_006717171.2 1 828 103
XM_011518694.1 XP_011516996.1 1 828 103
XM_011518695.1 XP_011516997.1 1 828 103
XM_011518696.2 XP_011516998.1 1 828 103
XM_011518697.1 XP_011516999.1 1 828 103
XM_017014718.1 XP_016870207.1 1 828 103
Gene Symbol: C9orf173-AS1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_038389.1 4 1554 103
GenBank mRNA AK097764.1 - 4 103
CB047271.1 - 1 103
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AL042345.1 - 1 Chr. 9 - 137250231 - 137250573 [+] on Build GRCh38 103
GenBankmRNA AI628548.1 - 1 Chr. 9 - 137250238 - 137250712 [+] on Build GRCh38 103
GenBankmRNA BM919551.1 - 429 Chr. - - [-] on Build 103
GenBankmRNA DB300894.1 - 1 Chr. 9 - 137250224 - 137250784 [+] on Build GRCh38 103
GenBankmRNA DB338548.1 - 1 Chr. 9 - 137250219 - 137250752 [+] on Build GRCh38 103
GenBankmRNA AA778183.1 - 1 Chr. 9 - 137250219 - 137250734 [+] on Build GRCh38 102
GenBankmRNA AI452390.1 - 1 Chr. 9 - 137250221 - 137250620 [+] on Build GRCh38 103
GenBankmRNA CB856523.1 - 1 329 Chr. 9 - 137250236 - 137250694 [-] on Build GRCh38 103
GenBankmRNA BX103784.1 - 1 Chr. 9 - 137250236 - 137250681 [+] on Build GRCh38 103
GenBankmRNA CB856522.1 - 1 Chr. 9 - 137250236 - 137250694 [+] on Build GRCh38 103
GenBankmRNA BF061435.1 - 1 Chr. 9 - 137250221 - 137250682 [+] on Build GRCh38 103

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream sperm-tail PG-rich repeat containing 3 STPG3 C9orf173 Anti-sense Chr. 9 - 137250840 - 137253483 on NCBI Build GRCh38
Downstream negative elongation factor complex member B NELFB COBRA1,
NELF-B 		3.9kb Anti-sense Chr. 9 - 137255300 - 137273548 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012049.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001768.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_006717108.2, XM_011518694.1, XM_011518695.1, XM_011518696.2, XM_011518697.1, XM_017014718.1 transcripts.

Set Membership:

 Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Homo sapiens 1700 Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina


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