Assay Details

Gene Symbol: PRPF3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004698.2	NP_004689.1	4 - 5	583		58
	XM_011510129.1	XP_011508431.1	5 - 6	625		58
	XM_011510131.2	XP_011508433.1	4 - 5	523		58
	XM_011510132.2	XP_011508434.1	4 - 5	523		58
	XM_017002791.1	XP_016858280.1	4 - 5	523		58
GenBank mRNA	AF016370.1	-	4 - 5	493		58
	AK222825.1	-	4 - 5	509		58
	AK297139.1	-	4 - 5	467		58
	AK299980.1	-	5 - 6	605		58
	AK312891.1	-	4 - 5	504		58
	BC000184.2	-	3 - 4	470	3351519	58
	BC001954.1	-	3 - 4	478	2905308	58

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009902.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001185.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK299980.1, XM_011510129.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PRPF3

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	ENST00000414970.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	ENST00000467329.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	ENST00000543398.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01018192.hg.1	TC01001185.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000470824.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000476970.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000493553.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009902.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	NM_004698.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	TC0100009902.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000496202.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000324862.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000467329.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	ENST00000467514.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100171492.hg.1	NM_004698.3	Refseq

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Catalog #	4351372
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System Message

Genomic Map