Assay Details

Gene Symbol: SS18
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005637.3	NP_005628.2	7 - 8	960		62
RefSeq	XM_011526152.2	XP_011524454.1	8 - 9	1083		62
GenBank mRNA	AK301504.1	-	7 - 8	965		62
	AK304305.1	-	8 - 9	1076		62
	AK316302.1	-	7 - 8	910		62
	AK316338.1	-	8 - 9	1029		62
	BC096221.1	-	7 - 8	897	40004908	62
	BC096224.1	-	7 - 8	897	40004912	62
	CR542088.1	-	7 - 8	894		62
	CR542103.1	-	7 - 8	894		62
	X79201.1	-	7 - 8	897		62

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800008331.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000423.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SS18

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000269137.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000269138.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000415083.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000539244.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000539849.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000542420.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000542743.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	ENST00000545952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	NM_001007559.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	NM_005637.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004309.hg.1	TC18000423.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000269137.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000269138.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000415083.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000539244.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000539849.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000542420.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000542743.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	ENST00000545952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	NM_001007559.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	NM_005637.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004310.hg.1	TC18000423.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000582092.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	TC1800008331.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000582092.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156783.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000582092.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	TC1800008331.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000582092.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156785.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	TC1800008331.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156786.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000539244.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_001308201.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	TC1800008331.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000269137.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000269138.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000415083.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000539244.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000542420.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000579640.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000580958.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	ENST00000585121.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_005637.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_001007559.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800156787.hg.1	NM_001308201.1	Refseq

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Catalog #	4351372
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Genomic Map