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- Gene Symbol:
-
LINC01343 - Gene Name:
- long intergenic non-protein coding RNA 1343
- Gene Aliases:
- -
- Chromosome Location:
- Chr.1: 38209034 - 38214767 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: LINC01343 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_038928.1 | 2 - 3 | 408 | 101 | ||
| GenBank mRNA | BC042675.2 | - | 1 - 2 | 359 | 101 | |
| BI827914.1 | - | 2 - 3 | 409 | 101 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | microRNA 3659 | MIR3659 | mir-3659 | -122.4kb | Anti-sense | Chr. 1 - 38089231 - 38089329 on NCBI Build GRCh38 |
| Downstream | Ras related GTP binding C | RRAGC |
GTR2, RAGC, TIB929 |
625.7kb | Sense | Chr. 1 - 38838197 - 38859823 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100013764.hg.1This assay targets the same location as HTA transcript cluster(s) TC01002532.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Homo sapiens
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146598 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146641 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146583 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146562 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146635 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170518 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170521 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146581 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146614 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146623 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146631 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146574 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146600 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146628 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146603 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146634 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146604 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170531 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146572 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146560 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170575 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170551 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170571 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050578 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170498 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146625 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170523 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146606 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146607 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146593 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146627 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146577 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146599 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146595 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170522 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146594 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146571 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146559 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146575 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146601 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146647 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146611 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146569 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170576 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170512 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146587 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146582 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050573 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146558 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170527 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146563 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146590 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170552 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146609 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146616 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146621 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170488 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050581 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146584 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146633 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050576 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146591 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146565 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146586 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146636 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170565 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050579 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170503 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P00146643 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15050577 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P20170548 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 173754 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3617655 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 10488 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3617655 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3617655 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P35094951 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 1562510_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039414.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039414.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039414.hg.1 | TC01002532.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039413.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039413.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039413.hg.1 | TC01002532.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202837.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202837.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202837.hg.1 | TC0100013764.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100202837.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202837.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202838.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202838.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202838.hg.1 | TC0100013764.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100202838.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202838.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202840.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202840.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202840.hg.1 | TC0100013764.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100202840.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202840.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202836.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202836.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100202836.hg.1 | TC0100013764.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100202836.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100202836.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | ENST00000431311.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100013764.hg.1 | NR_038928.1 | Refseq |
| Human Genome U133 Plus 2.0 Array | 1562510_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1562510_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1562510_at5 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A043827 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A043827 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 487265 | - | - |
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