Name: [Hs01399104_g1] [LINC00200]
Creator: Thermo Fisher Scientific
Keywords: [LINC00200] Assay, [long intergenic non-protein coding RNA 200] Assay

Assay Details

Gene Symbol: LINC00200
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015376.2		1 - 2	224		83
GenBank mRNA	AK097673.1	-	1 - 2	174		83
	BC133038.1	-	1 - 2	224		83
	BC133040.1	-	1 - 2	176		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB045405.1	-	1 - 2	174	Chr. 10 - 1159821 - 1162846 [+] on Build GRCh38	83
GenBankmRNA	BX508376.1	-	1 - 2	189	Chr. 10 - 1159804 - 1160997 [+] on Build GRCh38	83
GenBankmRNA	HY019456.1	-	1 - 2		Chr. 10 - 1159832 - 1205444 [+] on Build GRCh38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	WD repeat domain 37	WDR37		-27.5kb	Sense	Chr. 10 - 1056836 - 1132297 on NCBI Build GRCh38
Downstream	adenosine deaminase, RNA specific B2 (inactive)	ADARB2	ADAR3, RED2	16.7kb	Anti-sense	Chr. 10 - 1177313 - 1737476 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000006469.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000012.hg.1

Set Membership:

Amplicon length between 71 and 85

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10000157.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10000157.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10000157.hg.1	TC10000012.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10000156.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10000156.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10000156.hg.1	TC10000012.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	TC1000006469.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144347.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144347.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144347.hg.1	TC1000006469.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000144347.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144347.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	TC1000006469.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144349.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	NR_015376.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	TC1000006469.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	ENST00000425630.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	ENST00000583117.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000144350.hg.1	NR_015376.2	Refseq

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map