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Gene Symbol:
SOX2-OT
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs02802330_m1
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Availability Made To Order
Catalog # 4426961
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Assay Details

Gene Symbol: SOX2-OT
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_004053.3 3 - 4 771 79
NR_075091.1 6 - 7 786 79
GenBank mRNA AK022826.1 - 3 - 4 559 79
AL157425.1 - 1 - 2 278 79
BC041898.2 - 3 - 4 567 79
JQ408703.1 - 6 - 7 785 79
JX110620.1 - 5 - 6 877 79
JX504683.1 - 6 - 7 839 79
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB169465.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739741 [+] on Build GRCh38 79
GenBankmRNA DA254884.1 - 1 - 2 122 Chr. 3 - 181699766 - 181739903 [+] on Build GRCh38 79
GenBankmRNA DA278319.1 - 1 - 2 301 Chr. 3 - 181699588 - 181739728 [+] on Build GRCh38 79
GenBankmRNA HY304213.1 - 1 - 2 Chr. 3 - 181699583 - 181715255 [-] on Build GRCh38 79
GenBankmRNA DA164011.1 - 1 - 2 394 Chr. 3 - 181699496 - 181739642 [+] on Build GRCh38 79
GenBankmRNA DB480681.1 - 1 - 2 310 Chr. 3 - 181699578 - 181739624 [+] on Build GRCh38 79
GenBankmRNA DA286610.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739727 [+] on Build GRCh38 79
GenBankmRNA BI600313.1 - 3 - 4 606 Chr. 3 - 181610500 - 181739601 [+] on Build GRCh38 79
GenBankmRNA DA131865.1 - 1 - 2 321 Chr. 3 - 181699569 - 181739685 [+] on Build GRCh38 79
GenBankmRNA DA263226.1 - 1 - 2 315 Chr. 3 - 181699574 - 181739701 [+] on Build GRCh38 79
GenBankmRNA DA167857.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739728 [+] on Build GRCh38 79
GenBankmRNA DB475443.1 - 1 - 2 350 Chr. 3 - 181699538 - 181715294 [+] on Build GRCh38 79
GenBankmRNA DA175390.1 - 1 - 2 357 Chr. 3 - 181699531 - 181739676 [+] on Build GRCh38 79
GenBankmRNA DA362189.1 - 1 - 2 320 Chr. 3 - 181699575 - 181739608 [+] on Build GRCh38 79
GenBankmRNA DA167144.1 - 1 - 2 331 Chr. 3 - 181699558 - 181739615 [+] on Build GRCh38 79
GenBankmRNA DA272665.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739684 [+] on Build GRCh38 79
GenBankmRNA DA257051.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739615 [+] on Build GRCh38 79
GenBankmRNA DA139670.1 - 1 - 2 362 Chr. 3 - 181699527 - 181739684 [+] on Build GRCh38 79
GenBankmRNA DB175041.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739712 [+] on Build GRCh38 79
GenBankmRNA DA365386.1 - 1 - 2 287 Chr. 3 - 181699604 - 181739745 [+] on Build GRCh38 79
GenBankmRNA DA359248.1 - 1 - 2 319 Chr. 3 - 181699570 - 181739702 [+] on Build GRCh38 79
GenBankmRNA DA270048.1 - 1 - 2 313 Chr. 3 - 181699576 - 181739718 [+] on Build GRCh38 79
GenBankmRNA DA132079.1 - 1 - 2 316 Chr. 3 - 181699575 - 181739705 [+] on Build GRCh38 79
GenBankmRNA DA154575.1 - 1 - 2 276 Chr. 3 - 181699612 - 181739750 [+] on Build GRCh38 79
GenBankmRNA DB175631.1 - 1 - 2 313 Chr. 3 - 181699576 - 181739715 [+] on Build GRCh38 79
GenBankmRNA BI545922.1 - 1 - 2 360 Chr. 3 - 181699533 - 181739922 [+] on Build GRCh38 79
GenBankmRNA DA264487.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739615 [+] on Build GRCh38 79
GenBankmRNA DA369884.1 - 1 - 2 301 Chr. 3 - 181699588 - 181739716 [+] on Build GRCh38 79
GenBankmRNA DA268973.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739707 [+] on Build GRCh38 79
GenBankmRNA DA279068.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739717 [+] on Build GRCh38 79
GenBankmRNA DB482709.1 - 1 - 2 315 Chr. 3 - 181699575 - 181739650 [+] on Build GRCh38 79
GenBankmRNA DA142203.1 - 1 - 2 277 Chr. 3 - 181699612 - 181739740 [+] on Build GRCh38 79
GenBankmRNA DA277970.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739675 [+] on Build GRCh38 79
GenBankmRNA DA275725.1 - 1 - 2 277 Chr. 3 - 181699612 - 181739743 [+] on Build GRCh38 79
GenBankmRNA DA208447.1 - 1 - 2 355 Chr. 3 - 181699533 - 181739683 [+] on Build GRCh38 79
GenBankmRNA DA350278.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739675 [+] on Build GRCh38 79
GenBankmRNA DA130431.1 - 1 - 2 361 Chr. 3 - 181699527 - 181739662 [+] on Build GRCh38 79
GenBankmRNA DA290999.1 - 1 - 2 315 Chr. 3 - 181699575 - 181739724 [+] on Build GRCh38 79
GenBankmRNA DA284155.1 - 1 - 2 352 Chr. 3 - 181699546 - 181739675 [+] on Build GRCh38 79
GenBankmRNA DA165213.1 - 1 - 2 326 Chr. 3 - 181699575 - 181739701 [+] on Build GRCh38 79
GenBankmRNA DT219358.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739818 [+] on Build GRCh38 79
GenBankmRNA DA343465.1 - 1 - 2 283 Chr. 3 - 181699606 - 181739756 [+] on Build GRCh38 79
GenBankmRNA DA354554.1 - 1 - 2 315 Chr. 3 - 181699575 - 181739732 [+] on Build GRCh38 79
GenBankmRNA DA134901.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739706 [+] on Build GRCh38 79
GenBankmRNA DA369506.1 - 1 - 2 319 Chr. 3 - 181699570 - 181739718 [+] on Build GRCh38 79
GenBankmRNA DA248954.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739729 [+] on Build GRCh38 79
GenBankmRNA DA290283.1 - 1 - 2 388 Chr. 3 - 181699500 - 181739658 [+] on Build GRCh38 79
GenBankmRNA DA362148.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739729 [+] on Build GRCh38 79
GenBankmRNA DA278267.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739709 [+] on Build GRCh38 79
GenBankmRNA DA233431.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739727 [+] on Build GRCh38 79
GenBankmRNA BI601514.1 - 1 - 2 316 Chr. 3 - 181699575 - 181739998 [+] on Build GRCh38 79
GenBankmRNA DA180052.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739720 [+] on Build GRCh38 79
GenBankmRNA DA346811.1 - 1 - 2 315 Chr. 3 - 181699577 - 181739706 [+] on Build GRCh38 79
GenBankmRNA DA148233.1 - 1 - 2 320 Chr. 3 - 181699570 - 181739725 [+] on Build GRCh38 79
GenBankmRNA DA136099.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739785 [+] on Build GRCh38 79
GenBankmRNA DA140256.1 - 1 - 2 302 Chr. 3 - 181699587 - 181739722 [+] on Build GRCh38 79
GenBankmRNA DA349471.1 - 1 - 2 332 Chr. 3 - 181699559 - 181739691 [+] on Build GRCh38 79
GenBankmRNA DB505934.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739658 [+] on Build GRCh38 79
GenBankmRNA DA277074.1 - 1 - 2 316 Chr. 3 - 181699575 - 181739726 [+] on Build GRCh38 79
GenBankmRNA DA285311.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739689 [+] on Build GRCh38 79
GenBankmRNA DA368208.1 - 1 - 2 312 Chr. 3 - 181699576 - 181739737 [+] on Build GRCh38 79
GenBankmRNA DA303463.1 - 1 - 2 315 Chr. 3 - 181699577 - 181739737 [+] on Build GRCh38 79
GenBankmRNA DA270443.1 - 1 - 2 285 Chr. 3 - 181699604 - 181739755 [+] on Build GRCh38 79
GenBankmRNA AV725391.1 - 1 - 2 323 Chr. 3 - 181699565 - 181739947 [+] on Build GRCh38 79
GenBankmRNA DA283659.1 - 1 - 2 293 Chr. 3 - 181699596 - 181739753 [+] on Build GRCh38 79
GenBankmRNA DA412243.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739732 [+] on Build GRCh38 79
GenBankmRNA DA367963.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739710 [+] on Build GRCh38 79
GenBankmRNA BG701492.1 - 1 - 2 320 Chr. 3 - 181699575 - 181739974 [+] on Build GRCh38 79
GenBankmRNA DA345402.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739714 [+] on Build GRCh38 79
GenBankmRNA DA342800.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739728 [+] on Build GRCh38 79
GenBankmRNA DB180169.1 - 1 - 2 315 Chr. 3 - 181699575 - 181739704 [+] on Build GRCh38 79
GenBankmRNA DA357231.1 - 1 - 2 277 Chr. 3 - 181699612 - 181739753 [+] on Build GRCh38 79
GenBankmRNA DA259497.1 - 1 - 2 313 Chr. 3 - 181699576 - 181739615 [+] on Build GRCh38 79
GenBankmRNA DA410724.1 - 1 - 2 310 Chr. 3 - 181699580 - 181739615 [+] on Build GRCh38 79
GenBankmRNA DA286657.1 - 1 - 2 344 Chr. 3 - 181699546 - 181739688 [+] on Build GRCh38 79
GenBankmRNA DA352576.1 - 1 - 2 313 Chr. 3 - 181699575 - 181739732 [+] on Build GRCh38 79
GenBankmRNA DA365849.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739661 [+] on Build GRCh38 79
GenBankmRNA DB474842.1 - 1 - 2 315 Chr. 3 - 181699575 - 181739664 [+] on Build GRCh38 79
GenBankmRNA DA159447.1 - 1 - 2 314 Chr. 3 - 181699575 - 181739721 [+] on Build GRCh38 79
GenBankmRNA DA406068.1 - 1 - 2 314 Chr. 3 - 181699576 - 181739736 [+] on Build GRCh38 79
GenBankmRNA DA166593.1 - 1 - 2 317 Chr. 3 - 181699577 - 181739690 [+] on Build GRCh38 79
GenBankmRNA DA351387.1 - 1 - 2 316 Chr. 3 - 181699575 - 181739739 [+] on Build GRCh38 79
GenBankmRNA BI601220.1 - 1 - 2 316 Chr. 3 - 181699575 - 181739843 [+] on Build GRCh38 79
GenBankmRNA BI916139.1 - 1 - 2 361 Chr. 3 - 181699526 - 181739917 [+] on Build GRCh38 79
GenBankmRNA BI668091.1 - 1 - 2 313 Chr. 3 - 181699598 - 181739968 [+] on Build GRCh38 79
GenBankmRNA DA298250.1 - 1 - 2 277 Chr. 3 - 181699612 - 181739750 [+] on Build GRCh38 79

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream uncharacterized LOC102724604 LOC102724604 -257.1kb Anti-sense Chr. 3 - 181421163 - 181442486 on NCBI Build GRCh38
Downstream long intergenic non-protein coding RNA 1206 LINC01206 237.1kb Sense Chr. 3 - 181952364 - 182010678 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300009629.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000966.hg.1

Set Membership:

 Amplicon length between 71 and 85 Mammalian Gene Collection Homo sapiens Probe spans exons

MicroArray Probes:

Affymetrix


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