Name: [Hs03298703_s1] [SNORA50C]
Creator: Thermo Fisher Scientific
Keywords: [SNORA50C] Assay, [small nucleolar RNA, H/ACA box 50C] Assay

Assay Details

Gene Symbol: SNORA50C
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002995.1		1	63		75

Gene Symbol: SNHG25
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	CD050382.1	-		220		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI123657.1	-	1			Chr. 17 - 64146059 - 64146476 [-] on Build GRCh38	75
GenBankmRNA	CD174478.1	-	1	198		Chr. 17 - 64146223 - 64146476 [+] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	small nucleolar RNA, C/D box 104	SNORD104	U104	-182.0	Sense	Chr. 17 - 64146078 - 64146157 on NCBI Build GRCh38
Downstream	testis expressed 2	TEX2	HT008, TMEM96	962.0	Anti-sense	Chr. 17 - 64147433 - 64263323 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700008593.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17000776.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4008	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415112	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415108	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415110	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415105	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415105	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415108	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415110	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10415112	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10415106	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10415108	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17006366	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10415088	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10415089	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P10415112	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Genome U219 Array	11763896_at	-	-
Affymetrix Human Genome U219 Array	11763896_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR17010122.hg.1	ENST00000408535.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17010122.hg.1	NR_002995.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17010122.hg.1	TC17000776.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000408535.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000580828.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	ENST00000628590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	NR_002995.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700008593.hg.1	NR_132278.1	Refseq
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000408535.2	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000580828.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	ENST00000628590.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	NR_002995.1	Refseq
Affymetrix Human Clariom D Assay	TC1700008593.hg.1	NR_132278.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000408535.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000628590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	NR_002995.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	TC1700008593.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	NR_002995.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000408535.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000582965.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700164299.hg.1	ENST00000628590.1	Ensembl
Human Genome U95 Set	90086_PM_at	-	-
Human Genome U95 Set	90086_at	-	-

Availability	Made To Order
Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3237562	NR_002995.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3237562	NR_002995.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3237562	NR_002995.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3237562	NR_002995.1	human_transcriptome

System Message

Genomic Map