Name: [Hs03309311_s1] [SNORD60]
Creator: Thermo Fisher Scientific
Keywords: [SNORD60] Assay, [small nucleolar RNA, C/D box 60] Assay

Assay Details

Gene Symbol: SNORD60
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002736.1		1	36		83
GenBank mRNA	X96660.1	-	1	36		83

Gene Symbol: SNHG19
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	DA194369.1	-	1	289		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI699361.1	-	1		Chr. 16 - 2154804 - 2155198 [+] on Build GRCh38	83
GenBankmRNA	BQ771515.1	-	1		Chr. 16 - 2154802 - 2155340 [+] on Build GRCh38	83
GenBankmRNA	DA095544.1	-	1	289	Chr. 16 - 2154799 - 2155358 [-] on Build GRCh38	83
GenBankmRNA	AI140855.1	-	1		Chr. 16 - 2154803 - 2155303 [+] on Build GRCh38	83
GenBankmRNA	AA446990.1	-	1	275	Chr. 16 - 2154911 - 2155344 [-] on Build GRCh38	83
GenBankmRNA	AI870501.1	-	1		Chr. 16 - 2154803 - 2155265 [+] on Build GRCh38	83
GenBankmRNA	AI191822.1	-	1		Chr. 16 - 2154802 - 2155205 [+] on Build GRCh38	83
GenBankmRNA	AI186952.1	-	1		Chr. 16 - 2154802 - 2155210 [+] on Build GRCh38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RAB26, member RAS oncogene family	RAB26	V46133	-883.0	Anti-sense	Chr. 16 - 2148144 - 2154165 on NCBI Build GRCh38
Downstream	TNF receptor associated factor 7	TRAF7	RFWD1, RNF119	648.0	Anti-sense	Chr. 16 - 2155752 - 2178129 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600009095.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000776.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_3851	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889338	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889339	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889338	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889339	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889338	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889305	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889289	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889293	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842229	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842236	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842242	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889306	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842233	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889291	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889307	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889298	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842240	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889313	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889301	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842261	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889304	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889343	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889339	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842231	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889294	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889303	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842239	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889290	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889311	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	NR_002736_at	-	-
Affymetrix Human Gene 1.0 ST Array	7998723	-	-
Affymetrix Human Gene 1.1 ST Array	7998722	-	-
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	NR_002736.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	NR_002736.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	TC16000776.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	TC1600009095.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	NR_002736.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3238481	NR_002736.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3238481	X96660.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map