Name: [Hs03669364_m1] [PCAT18]
Creator: Thermo Fisher Scientific
Keywords: [PCAT18] Assay, [prostate cancer associated transcript 18 (non-protein coding)] Assay

Assay Details

Gene Symbol: PCAT18
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024259.1		1 - 2	245		83
GenBank mRNA	AK056805.1	-	1 - 2	245		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA865211.1	-	1 - 2	245		Chr. 18 - 26689394 - 26703638 [-] on Build GRCh38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	potassium channel tetramerization domain containing 1	KCTD1	C18orf5, SENS	-30.2kb	Sense	Chr. 18 - 26454910 - 26657401 on NCBI Build GRCh38
Downstream	aquaporin 4	AQP4	MIWC, WCH4	148.4kb	Sense	Chr. 18 - 26852038 - 26865844 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800008343.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000428.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

1700

Probe spans exons

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18004343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004343.hg.1	TC18000428.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18004345.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004345.hg.1	TC18000428.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004346.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004346.hg.1	TC18000428.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18004344.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004344.hg.1	NR_024259.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004344.hg.1	TC18000428.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1800006950.hg.1	ENST00000583852.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006950.hg.1	ENST00000583852.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156892.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156892.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156892.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156892.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156892.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156896.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156896.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156896.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156896.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156896.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156898.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156898.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156898.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156898.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156898.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156891.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156891.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156891.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156891.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156891.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156899.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156899.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156899.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156899.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156899.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800006950.hg.1	ENST00000583852.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006950.hg.1	ENST00000583852.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156897.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156897.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156897.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156897.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156897.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008343.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156894.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	NR_024259.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	TC1800008343.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000391065.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	ENST00000579458.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156895.hg.1	NR_024259.1	Refseq

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Catalog #	4426961
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Genomic Map