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          • Home
          • › Search Tool
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          • › Hs03670146_s1
          See other CASC7 GE Assays ›
          Gene Symbol:
          CASC7 AGO2
          Gene Name:
          cancer susceptibility candidate 7 (non-protein coding)
          argonaute 2, RISC catalytic component
          Gene Aliases:
          LINC00980
          EIF2C2, Q10
          Chromosome Location:
          -
          Chromosome Location:
          Chr.8: 140520158 - 140642406 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          -
          Assay ID Hs03670146_s1
          Size
          Availability Made To Order
          Catalog # 4426961
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: CASC7
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          GenBank mRNA AK092172.1 - 1 2751 91
          Gene Symbol: AGO2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_011516965.2 XP_011515267.1 19 10989 91
          XM_011516966.2 XP_011515268.1 19 8730 91
          XM_011516968.2 XP_011515270.2 19 8064 91
          XM_017013317.1 XP_016868806.1 18 7682 91
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
          GenBankmRNA DB323170.1 - 1 Chr. 8 - 140526669 - 140527200 [+] on Build GRCh38 91
          GenBankmRNA AI733824.1 - 1 Chr. 8 - 140526669 - 140527148 [+] on Build GRCh38 91
          GenBankmRNA AI263575.1 - 1 Chr. 8 - 140526669 - 140526997 [+] on Build GRCh38 91
          GenBankmRNA BM464843.1 - 1 505 Chr. 8 - 140526336 - 140527256 [-] on Build GRCh38 91
          GenBankmRNA AW043897.1 - 1 Chr. 8 - 140526410 - 140526809 [+] on Build GRCh38 91
          GenBankmRNA CA425667.1 - 1 Chr. 8 - 140526542 - 140527196 [+] on Build GRCh38 91
          GenBankmRNA AL602212.1 - 1 337 Chr. 8 - 140526488 - 140527088 [-] on Build GRCh38 91
          GenBankmRNA DB327156.1 - 1 Chr. 8 - 140526669 - 140527200 [+] on Build GRCh38 91

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream chromatin accessibility complex 1 CHRAC1 CHARC1,
          CHARC15,
          CHRAC-1,
          CHRAC-15,
          CHRAC15,
          YCL1
          -9.5kb Anti-sense Chr. 8 - 140511298 - 140517153 on NCBI Build GRCh38
          Downstream protein tyrosine kinase 2 PTK2 FADK,
          FAK,
          FAK1,
          FRNK,
          PPP1R71,
          p125FAK,
          pp125FAK
          128.9kb Sense Chr. 8 - 140658382 - 141001313 on NCBI Build GRCh38

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          More Information


          Additional Information:

          Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

          Set Membership:

          Amplicon length between 86 and 100 3' Most Detect Genomic DNA Homo sapiens Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          transcription, DNA-templated
          translation
          translational initiation
          Wnt signaling pathway, calcium modulating pathway
          post-embryonic development
          RNA secondary structure unwinding
          miRNA metabolic process
          gene silencing by RNA
          pre-miRNA processing
          siRNA loading onto RISC involved in RNA interference
          post-transcriptional gene silencing by RNA
          production of miRNAs involved in gene silencing by miRNA
          miRNA mediated inhibition of translation
          mRNA cleavage involved in gene silencing by miRNA
          miRNA loading onto RISC involved in gene silencing by miRNA
          positive regulation of transcription by RNA polymerase II
          negative regulation of translational initiation
          phosphatidylinositol-mediated signaling
          positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
          RNA phosphodiester bond hydrolysis, endonucleolytic
          mRNA cleavage involved in gene silencing by siRNA
          positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
          RNA 7-methylguanosine cap binding
          RNA polymerase II complex binding
          core promoter sequence-specific DNA binding
          RNA binding
          double-stranded RNA binding
          single-stranded RNA binding
          mRNA binding
          translation initiation factor activity
          endoribonuclease activity
          protein binding
          protein C-terminus binding
          siRNA binding
          miRNA binding
          metal ion binding
          endoribonuclease activity, cleaving siRNA-paired mRNA
          endoribonuclease activity, cleaving miRNA-paired mRNA

          MicroArray Probes:

          Agilent Affymetrix

          Array Name Probe IDs Targets Target Type
          Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M 256152 - -
          Agilent Whole Human Genome Microarray 4x44K v2 A_33_P3651911 - -
          Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray 1909 - -
          SurePrint G3 Human GE Microarray G4851A A_33_P3651911 - -
          Agilent Human Genome 244K CGH Microarray (Alpha Test) A_16_P02038627 - -
          Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) A_16_P18513492 - -
          Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) A_16_P02038627 - -
          Agilent Human 1B Microarray G4111A A_32_P355555 - -
          Agilent SurePrint G3 Human CGH Microarray 2x400K A_16_P02038627 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix HT HG-U133+ PM Array Plate 243304_PM_at - -
          Human Genome U133 Plus 2.0 Array 243304_at - -
          Human Genome U133 Plus 2.0 Array 243304_PM_at - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at3 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at8 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at4 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at6 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at2 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at9 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at5 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at1 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at7 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at11 - -
          Affymetrix Human Genome U133 Plus 2.0 Array 243304_at10 - -
          Human Genome U95 Set 82897_at - -
          Human Genome U95 Set 82897_PM_at - -
          Human Genome U133 Set 243304_at - -
          Human Genome U133 Set 243304_PM_at - -

          Back To Top

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