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- Gene Symbol:
-
LOC399815 - Gene Name:
- chromosome 10 open reading frame 88 pseudogene
- Gene Aliases:
- -
- Chromosome Location:
- Chr.10: 122879633 - 122898714 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC399815 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027282.1 | 2 - 3 | 530 | 101 | ||
| GenBank mRNA | AK300776.1 | - | 2 - 3 | 434 | 101 | |
| BC053499.1 | - | 4 - 5 | 775 | 101 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | FAM24B-CUZD1 readthrough | FAM24B-CUZD1 | -1.0kb | Anti-sense | Chr. 10 - 122832155 - 122879641 on NCBI Build GRCh38 | |
| Downstream | family with sequence similarity 24 member A | FAM24A | 29.0kb | Sense | Chr. 10 - 122910595 - 122913111 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1000009163.hg.1This assay targets the same location as HTA transcript cluster(s) TC10000893.hg.1
Additional Information:
This assay is in the 5'UTR region of the AK300776.1, BC053499.1 transcripts.
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Homo sapiens
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928972 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538154 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928984 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928970 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538146 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928976 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928978 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538152 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538143 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928977 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928971 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538151 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538145 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928963 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928982 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928985 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P07538163 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928975 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928968 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P27928981 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | AJ608770.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | AJ608771.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | AJ626860.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | AJ626861.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | AK128650.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | CR936716.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | NM_001018088.1 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | NM_017684.3 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | NM_018080.2 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 149582 | NM_020821.1 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 653395 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 90425 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 748081 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 838174 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 186232 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 771100 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 114055 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | AK289872.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | BC004913.2 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | BC010450.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | CR592333.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | CR592335.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | CR593687.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | CR597848.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | NM_005973.4 | refseq_mrna_human_NM |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | S69270.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 189781 | X97124.1 | genbank_mrna_human |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 30914 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 136110 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 224764 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 151741 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3607359 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_5096 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_5095 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 32305 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 16472 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P39209359 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P19096149 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3607359 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3607359 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928891 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928887 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928885 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928886 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538082 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928892 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928888 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928891 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928885 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538089 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928888 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928887 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538086 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928886 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27928892 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07538082 | - | - |
| Agilent Human Genome CGH Microarray 105A (G4412A) | A_16_P19096149 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 130694 | - | - |
| Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015 | 103133 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P39209350 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P02361850 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P19096149 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538162 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538166 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538167 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538177 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538081 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538076 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538191 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538170 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538186 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538182 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538147 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538085 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538144 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538175 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538184 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538154 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538164 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538172 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538156 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538180 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538089 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538188 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538088 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538146 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538150 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538152 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538159 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538079 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538179 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07538083 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P02361850 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P19096149 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P39209359 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P19096176 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Genome U219 Array | 11749606_at | - | - |
| Affymetrix Human Genome U219 Array | 11749606_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11749607_PM_x_at | - | - |
| Affymetrix Human Genome U219 Array | 11749607_x_at | - | - |
| Affymetrix Human Genome U219 Array | 11755528_PM_a_at | - | - |
| Affymetrix Human Genome U219 Array | 11755528_a_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010948.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010948.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010942.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010942.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010944.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010944.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010945.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010945.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010947.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010947.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010947.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010946.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010946.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR10010946.hg.1 | TC10000893.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1000162879.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162879.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162879.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162879.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162879.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162883.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162883.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162883.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162886.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162887.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162890.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162890.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162890.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162890.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162890.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162891.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162891.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162891.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | ENST00000425266.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162889.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162885.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162885.hg.1 | NR_027282.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1000162885.hg.1 | TC1000009163.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1000162885.hg.1 | ENST00000368895.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1000162885.hg.1 | NR_027282.1 | Refseq |
| Human Genome U95 Set | 56397_at | - | - |
| Human Genome U95 Set | 56397_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A044602 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A044602 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 210925 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1793686 | BC053499.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_1793686 | NR_027282.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_1793686 | AK300776.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1793686 | BC053499.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1793686 | NR_027282.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1793686 | AK300776.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1793686 | BC053499.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1793686 | NR_027282.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1793686 | AK300776.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1793686 | BC053499.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1793686 | NR_027282.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1793686 | AK300776.1 | human_transcriptome |
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