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- Gene Symbol:
-
XPA - Gene Name:
- XPA, DNA damage recognition and repair factor
- Gene Aliases:
- XP1, XPAC
- Chromosome Location:
- Chr.9: 97654398 - 97697409 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: XPA | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027302.1 | 6 - 7 | 1020 | 94 | ||
| GenBank mRNA | AI961077.1 | - | 1 - 2 | 94 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | nuclear cap binding protein subunit 1 | NCBP1 |
CBP80, NCBP, Sto1 |
-1.2kb | Anti-sense | Chr. 9 - 97633423 - 97673748 on NCBI Build GRCh38 |
| Downstream | papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding) | PTCSC2 | 27.5kb | Sense | Chr. 9 - 97709920 - 97853093 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900010950.hg.1This assay targets the same location as HTA transcript cluster(s) TC09001397.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Homo sapiens
1700
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
nucleotide-excision repair, DNA damage recognition
nucleotide-excision repair, DNA duplex unwinding
DNA repair
transcription-coupled nucleotide-excision repair
base-excision repair
nucleotide-excision repair, preincision complex stabilization
nucleotide-excision repair, preincision complex assembly
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
response to oxidative stress
intrinsic apoptotic signaling pathway in response to DNA damage
response to toxic substance
response to auditory stimulus
nucleotide-excision repair, DNA incision
multicellular organism growth
global genome nucleotide-excision repair
UV-damage excision repair
nucleotide-excision repair involved in interstrand cross-link repair
damaged DNA binding
protein binding
protein domain specific binding
protein homodimerization activity
metal ion binding
nucleotide-excision repair, DNA damage recognition
nucleotide-excision repair, DNA duplex unwinding
DNA repair
transcription-coupled nucleotide-excision repair
base-excision repair
nucleotide-excision repair, preincision complex stabilization
nucleotide-excision repair, preincision complex assembly
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
response to oxidative stress
intrinsic apoptotic signaling pathway in response to DNA damage
response to toxic substance
response to auditory stimulus
nucleotide-excision repair, DNA incision
multicellular organism growth
global genome nucleotide-excision repair
UV-damage excision repair
nucleotide-excision repair involved in interstrand cross-link repair
damaged DNA binding
protein binding
protein domain specific binding
protein homodimerization activity
metal ion binding
MicroArray Probes:
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR09017382.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017382.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017382.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017382.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017382.hg.1 | TC09001397.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017381.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017381.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017381.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017381.hg.1 | TC09001397.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | TC0900010950.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174620.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174625.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174625.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174625.hg.1 | TC0900010950.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900174625.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174625.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | TC0900010950.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174619.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | TC0900010950.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174621.hg.1 | NR_027302.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 183204 | - | - |
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