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          • Home
          • › Search Tool
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          • › Hs03681298_m1
          See other CLCA4 GE Assays ›
          Gene Symbol:
          CLCA4
          Gene Name:
          chloride channel accessory 4
          Gene Aliases:
          CaCC, CaCC2
          Chromosome Location:
          Chr.1: 86547076 - 86580758 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          Assay ID Hs03681298_m1
          Size
          Availability Made To Order
          Catalog # 4426961
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: CLCA4
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NR_024602.1 3 - 4 496 120
          GenBank mRNA AK307785.1 - 3 - 4 441 121
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
          GenBankmRNA DC335274.1 - 3 - 4 320 Chr. 1 - 86547252 - 86565892 [+] on Build GRCh38 120
          GenBankmRNA DC341341.1 - 3 - 4 334 Chr. 1 - 86547240 - 86565878 [+] on Build GRCh38 120
          GenBankmRNA DC341211.1 - 3 - 4 401 Chr. 1 - 86547172 - 86565453 [+] on Build GRCh38 120
          GenBankmRNA DB087913.1 - 3 - 4 433 Chr. 1 - 86549434 - 86565392 [+] on Build GRCh38 120
          GenBankmRNA DC316388.1 - 3 - 4 442 Chr. 1 - 86547132 - 86565408 [+] on Build GRCh38 121
          GenBankmRNA DC341240.1 - 3 - 4 372 Chr. 1 - 86547201 - 86565453 [+] on Build GRCh38 120

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream chloride channel accessory 1 CLCA1 CACC,
          CACC1,
          CLCRG1,
          CaCC-1,
          GOB5,
          hCLCA1,
          hCaCC-1
          -59.9kb Sense Chr. 1 - 86468843 - 86500294 on NCBI Build GRCh38
          Downstream chloride channel accessory 3,
          pseudogene
          CLCA3P CLCA3 68.8kb Sense Chr. 1 - 86634276 - 86655376 on NCBI Build GRCh38

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          More Information


          Updated Mapping Information

          This assay targets the same location as Clariom D transcript cluster(s) TC0100008924.hg.1
          This assay targets the same location as HTA transcript cluster(s) TC01000823.hg.1

          Set Membership:

          Amplicon length greater than or equal to 101 Homo sapiens Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          proteolysis
          transport
          ion transmembrane transport
          chloride transmembrane transport
          metalloendopeptidase activity
          intracellular calcium activated chloride channel activity
          chloride channel activity
          metal ion binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Human Transcriptome Array 2.0 PSR01013105.hg.1 ENST00000370563.3 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR01013105.hg.1 NM_012128.3 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR01013105.hg.1 NR_024602.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR01013105.hg.1 TC01000823.hg.1 HTA TC
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 ENST00000370563.3 Ensembl
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 NM_012128.3 Refseq
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 NR_024602.1 Refseq
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 TC0100008924.hg.1 Clariom D TC
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 NR_024602.1 Refseq
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 ENST00000370563.3 Ensembl
          Affymetrix Human Clariom D Assay PSR0100163669.hg.1 NM_012128.3 Refseq

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