Name: [Hs03872223_m1] [SMC5-AS1]
Creator: Thermo Fisher Scientific
Keywords: [SMC5-AS1] Assay, [SMC5 antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: SMC5-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_039990.1		2 - 3	491		69
GenBank mRNA	BC040840.1	-	2 - 3	491		69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	MAM domain containing 2	MAMDC2		-2.2kb	Anti-sense	Chr. 9 - 70043519 - 70226972 on NCBI Build GRCh38
Downstream	structural maintenance of chromosomes 5	SMC5	SMC5L1	1.0kb	Anti-sense	Chr. 9 - 70258962 - 70354873 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900010362.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001199.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27059823	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27059825	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27059821	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	118634	AJ223814.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	118634	AK026934.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	118634	BC106878.2	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	118634	BC106879.2	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	118634	NM_003162.2	refseq_mrna_human_NM
Agilent SurePrint G3 Human CGH Microarray 4x180K	58924	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	9454	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	797572	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	718693	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	585088	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	368859	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	211577	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	380897	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	935699	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P18641805	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P18641823	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_16_P18641823	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P18641823	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P18641805	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P02102119	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	108853	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	157300	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	26083	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P26563871	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P02102124	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P02102138	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18641823	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P02102119	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18641829	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18641809	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18641811	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18641805	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P16854888	-	-
Agilent Human 1B Microarray G4111A	A_32_P500625	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P18641805	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_18_P26563871	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P18641823	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P02102119	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09015336.hg.1	NR_039990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015336.hg.1	TC09001199.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015339.hg.1	NR_039990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015339.hg.1	TC09001199.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09015337.hg.1	NR_039990.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09015337.hg.1	TC09001199.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0900170930.hg.1	NR_039990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900170930.hg.1	TC0900010362.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900170930.hg.1	NR_039990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900170936.hg.1	NR_039990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900170936.hg.1	TC0900010362.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900170936.hg.1	NR_039990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900170932.hg.1	ENST00000594708.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900170932.hg.1	NR_039990.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900170932.hg.1	TC0900010362.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0900170932.hg.1	ENST00000594708.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900170932.hg.1	NR_039990.1	Refseq
Human Genome U133 Plus 2.0 Array	1557693_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1557693_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557693_at3	-	-
Human Genome U95 Set	91359_r_at	-	-
Human Genome U95 Set	91359_PM_r_at	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map