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- Gene Symbol:
-
PGCP1 - Gene Name:
- progastricsin pseudogene 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.1: 111384519 - 111389851 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: PGCP1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_029429.1 | 4 - 5 | 533 | 78 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | primary cilia formation | PIFO |
C1orf88, pitchfork |
-31.5kb | Anti-sense | Chr. 1 - 111324663 - 111353017 on NCBI Build GRCh38 |
| Downstream | oviductal glycoprotein 1 | OVGP1 |
CHIT5, EGP, MUC9, OGP |
27.5kb | Sense | Chr. 1 - 111414315 - 111427777 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100015270.hg.1This assay targets the same location as HTA transcript cluster(s) TC01002983.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Homo sapiens
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458139 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490783 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458148 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458145 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490776 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458128 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458144 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490764 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490749 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458132 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490785 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490784 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458141 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458117 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490757 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458131 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490753 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490780 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490771 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458127 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458109 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15099807 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490781 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458117 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15099807 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490785 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458141 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490784 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490749 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490757 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458144 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458128 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458132 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458145 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490780 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458139 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458127 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490753 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490776 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458148 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458109 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490764 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490771 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490781 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458131 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00458121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20490783 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR01046300.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01046300.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01046300.hg.1 | TC01002983.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | TC0100015270.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100213832.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000411951.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | ENST00000436252.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100015270.hg.1 | NR_029429.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A049530 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A049530 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1913475 | DV080282.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1913475 | DV080282.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1886940 | - | - |
| Illumina Sentrix Human-6 v2 Expression BeadChip | ILMN_120568 | - | - |
| Illumina HumanRef-6 v2.0 expression beadchip | ILMN_120568 | - | - |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1913475 | DV080282.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1913475 | DV080282.1 | human_transcriptome |
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