Assay Details

Gene Symbol: MIRLET7E
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029482.1		1	38		69

Gene Symbol: SPACA6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017026299.1	XP_016881788.1	1	1003		69

Gene Symbol: SPACA6P-AS
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_108100.1		1			69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 99b	MIR99B	MIRN99B, mir-99b	-105.0	Sense	Chr. 19 - 51692612 - 51692681 on NCBI Build GRCh38
Downstream	microRNA 125a	MIR125A	MIRN125A, miRNA125A, mir-125a	390.0	Sense	Chr. 19 - 51693254 - 51693339 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1900008663.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19000785.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_017026299.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.1 ST Array	8030844	-	-
Affymetrix Human Transcriptome Array 2.0	TC1900008663.hg.1	ENST00000362102.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008663.hg.1	NR_029482.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19011039.hg.1	ENST00000362102.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19011039.hg.1	NR_029482.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19011039.hg.1	TC19000785.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1900167630.hg.1	ENST00000362102.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1900167630.hg.1	NR_029482.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900167630.hg.1	TC1900008663.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900167630.hg.1	NR_029482.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900167630.hg.1	ENST00000362102.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900008663.hg.1	ENST00000362102.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900008663.hg.1	NR_029482.1	Refseq

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Agilent Whole Chr array_18 19 21	A_17_P10993887	-	-
Agilent Whole Chr array_18 19 21	A_17_P10993888	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10993888	-	-
Agilent Whole Chr array_18 19 21	A_17_P10993888	-	-
Agilent Whole Chr array_18 19 21	A_17_P10993887	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P10993888	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3310281	NR_029482.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3310281	NR_029482.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3310281	NR_029482.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3310281	NR_029482.1	human_transcriptome

System Message

Genomic Map