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          • Home
          • › Search Tool
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          • › Hs04232343_m1
          See other MAVS GE Assays ›
          Gene Symbol:
          MAVS
          Gene Name:
          mitochondrial antiviral signaling protein
          Gene Aliases:
          CARDIF, IPS-1, IPS1, VISA
          Chromosome Location:
          Chr.20: 3846799 - 3876123 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          Assay ID Hs04232343_m1
          Size
          Availability Made To Order
          Catalog # 4426961
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: MAVS
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NR_037921.1 3 - 4 463 61
          GenBank mRNA AK296897.1 - 3 - 4 428 61
          EF467324.1 - 2 - 3 291 61
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
          GenBankmRNA DC347239.1 - 3 - 4 428 Chr. 20 - 3846834 - 3862362 [+] on Build GRCh38 61
          GenBankmRNA DC375415.1 - 3 - 4 425 Chr. 20 - 3846837 - 3862409 [+] on Build GRCh38 61
          GenBankmRNA DC390311.1 - 3 - 4 425 Chr. 20 - 3846837 - 3862393 [+] on Build GRCh38 61
          GenBankmRNA DC407571.1 - 3 - 4 425 Chr. 20 - 3846837 - 3862391 [+] on Build GRCh38 61

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream adaptor related protein complex 5 sigma 1 subunit AP5S1 C20orf29 -32.3kb Sense Chr. 20 - 3820524 - 3825307 on NCBI Build GRCh38
          Downstream pantothenate kinase 2 PANK2 C20orf48,
          HARP,
          HSS,
          NBIA1,
          PKAN
          26.4kb Sense Chr. 20 - 3888839 - 3929882 on NCBI Build GRCh38

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          More Information


          Updated Mapping Information

          This assay targets the same location as Clariom D transcript cluster(s) TC2000006561.hg.1
          This assay targets the same location as HTA transcript cluster(s) TC20000043.hg.1

          Set Membership:

          Amplicon length less than or equal to 70 Homo sapiens Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of protein phosphorylation
          activation of innate immune response
          positive regulation of defense response to virus by host
          signal transduction
          negative regulation of type I interferon production
          positive regulation of interferon-alpha production
          positive regulation of interferon-beta production
          positive regulation of interleukin-8 production
          positive regulation of tumor necrosis factor production
          RIG-I signaling pathway
          defense response to bacterium
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          negative regulation of viral genome replication
          innate immune response
          positive regulation of transcription by RNA polymerase II
          positive regulation of DNA-binding transcription factor activity
          defense response to virus
          positive regulation of type I interferon-mediated signaling pathway
          cellular response to exogenous dsRNA
          positive regulation of chemokine (C-C motif) ligand 5 production
          positive regulation of IP-10 production
          regulation of peroxisome organization
          protein binding
          protein kinase binding
          CARD domain binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 TC20000043.hg.1 HTA TC
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 ENST00000358134.6 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 ENST00000416600.2 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 ENST00000428216.2 Ensembl
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 NM_001206491.1 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 NM_020746.4 Refseq
          Affymetrix Human Transcriptome Array 2.0 PSR20000737.hg.1 NR_037921.1 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 ENST00000416600.6 Ensembl
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 ENST00000428216.3 Ensembl
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NM_001206491.1 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NM_020746.4 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NR_037921.1 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 TC2000006561.hg.1 Clariom D TC
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NM_020746.4 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 ENST00000416600.6 Ensembl
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 ENST00000428216.3 Ensembl
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NM_001206491.1 Refseq
          Affymetrix Human Clariom D Assay PSR2000145158.hg.1 NR_037921.1 Refseq

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