Name: [Hs04273890_m1] [LINC00890]
Creator: Thermo Fisher Scientific
Keywords: [LINC00890] Assay, [long intergenic non-protein coding RNA 890] Assay

Assay Details

Gene Symbol: LINC00890
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033974.1		2 - 3	269		89
GenBank mRNA	BX537697.1	-	2 - 3	258		89
GenBank mRNA	DR005240.1	-	2 - 3	269		89

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB291963.1	-	2 - 3	259	Chr. X - 111511672 - 111518394 [+] on Build GRCh38	89
GenBankmRNA	AL708945.1	-	2 - 3	184	Chr. X - 111511752 - 111518534 [+] on Build GRCh38	89
GenBankmRNA	DB186223.1	-	2 - 3	244	Chr. X - 111511687 - 111518409 [+] on Build GRCh38	89
GenBankmRNA	DB256424.1	-	1 - 2	314	Chr. X - 111511780 - 111518166 [+] on Build GRCh38	89
GenBankmRNA	DB284868.1	-	2 - 3	256	Chr. X - 111511676 - 111518366 [+] on Build GRCh38	89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	doublecortin	DCX	DBCN, DC, LISX, SCLH, XLIS	-99.8kb	Anti-sense	Chr. X - 111293779 - 111412232 on NCBI Build GRCh38
Downstream	ALG13, UDP-N-acetylglucosaminyltransferase subunit	ALG13	CDG1S, CXorf45, EIEE36, GLT28D1, MDS031, TDRD13, YGL047W	158.3kb	Sense	Chr. X - 111680741 - 111764164 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00011320.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X000545.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618573	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618660	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618685	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387423	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888636	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618633	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888688	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618688	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618704	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618687	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618619	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618653	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888626	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618610	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618658	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618586	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618581	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618585	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888597	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618644	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618556	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618668	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387411	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888634	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618652	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888710	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618618	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618641	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618616	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888704	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618594	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618559	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618620	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888675	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618691	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888694	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387414	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888718	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387418	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618701	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888659	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618621	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618614	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618554	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618551	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618631	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618675	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618690	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618682	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618605	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888623	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618674	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618647	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618657	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618632	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618699	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888595	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618693	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618624	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618679	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618553	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888608	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618703	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618700	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618565	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618662	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618663	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888683	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618591	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618678	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618601	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618677	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618629	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888676	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618552	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618574	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387413	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618670	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618697	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618589	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888653	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888602	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618655	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618567	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888635	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888685	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618646	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618673	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888639	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618598	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888670	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888579	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618575	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618590	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888707	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618630	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888613	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888697	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17387420	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888617	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618639	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618617	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888631	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888682	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888700	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888655	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618659	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618636	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618665	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888737	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618676	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618557	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618608	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888592	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618580	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888591	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618683	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888666	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888630	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888587	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888665	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618578	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888615	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618667	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618612	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888734	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618656	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618579	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618593	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618672	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11888740	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618707	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618625	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618568	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618627	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618549	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618626	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618705	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618686	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618596	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32618609	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	743649	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	956318	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	605281	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	699814	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	43095	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	365555	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3565067	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	22979	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3565067	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3565067	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P21555312	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P03749526	-	-
Agilent Human 1B Microarray G4111A	A_32_P389026	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P21555312	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X007311.hg.1	NR_033974.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X007311.hg.1	TC0X000545.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0X00177884.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177884.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177884.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00177884.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177884.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177885.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177885.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177885.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00177885.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177885.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177882.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011320.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	NR_033974.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	TC0X00011320.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	ENST00000563467.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	ENST00000569275.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00177883.hg.1	NR_033974.1	Refseq
Human Genome U95 Set	49770_at	-	-
Human Genome U95 Set	49770_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A041410	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A041410	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina human-6 v2.0 expression beadchip	ILMN_1868150	-	-
Illumina Sentrix Human-6 v2 Expression BeadChip	2100255	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_74518	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1868150	-	-
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1868150	-	-
Illumina HumanWG-6_V2_0_R2	ILMN_1868150	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map