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Gene Symbol:
SPATA42
Gene Name:
Gene Aliases:
Species:
Human
Species Specific ID (Flybase ID):
Assay ID Hs04274090_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: SPATA42
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_034168.1 1 - 2 285 125
NR_049777.1 1 - 2 285 125
GenBank mRNA AA401510.1 - 1 - 2 258 125
AY312144.1 - 1 - 2 285 125
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AI024842.1 - 2 - 3 Chr. 1 - 108857286 - 108858526 [-] on Build GRCh38 125
GenBankmRNA AI208469.1 - 2 - 3 Chr. 1 - 108857422 - 108858524 [-] on Build GRCh38 125
GenBankmRNA HY208765.1 - 1 - 2 Chr. 1 - 108857213 - 108858333 [-] on Build GRCh38 125
GenBankmRNA AA382528.1 - 1 - 2 199 Chr. 1 - 108857303 - 108858301 [+] on Build GRCh38 125
GenBankmRNA AA813459.1 - 1 - 2 Chr. 1 - 108857388 - 108858340 [-] on Build GRCh38 125
GenBankmRNA AI023191.1 - 1 - 2 Chr. 1 - 108857403 - 108858340 [-] on Build GRCh38 125
GenBankmRNA AI223419.1 - 1 - 2 Chr. 1 - 108857373 - 108858340 [-] on Build GRCh38 125
GenBankmRNA AI187958.1 - 1 - 2 Chr. 1 - 108857375 - 108858340 [-] on Build GRCh38 125
GenBankmRNA AA448384.1 - 1 - 2 Chr. 1 - 108857283 - 108858340 [-] on Build GRCh38 125
GenBankmRNA HY019767.1 - 1 - 2 251 Chr. 1 - 108857252 - 108858339 [+] on Build GRCh38 125
GenBankmRNA AI025232.1 - 1 - 2 Chr. 1 - 108857306 - 108858340 [-] on Build GRCh38 125
GenBankmRNA CR748388.1 - 1 - 2 285 Chr. 1 - 108857217 - 108858340 [+] on Build GRCh38 125
GenBankmRNA HY202977.1 - 1 - 2 Chr. 1 - 108857269 - 108858333 [-] on Build GRCh38 125
GenBankmRNA AA400275.1 - 1 - 2 Chr. 1 - 108857281 - 108858339 [-] on Build GRCh38 125
GenBankmRNA AI149623.1 - 1 - 2 Chr. 1 - 108857258 - 108858340 [-] on Build GRCh38 125
GenBankmRNA AA448427.1 - 1 - 2 188 Chr. 1 - 108857314 - 108858340 [+] on Build GRCh38 125
GenBankmRNA AA861109.1 - 2 - 3 Chr. 1 - 108857300 - 108858524 [-] on Build GRCh38 125
GenBankmRNA HY185113.1 - 1 - 2 Chr. 1 - 108857197 - 108858333 [-] on Build GRCh38 125
GenBankmRNA HY001736.1 - 1 - 2 309 Chr. 1 - 108857194 - 108858331 [+] on Build GRCh38 125
GenBankmRNA AA412715.1 - 1 - 2 Chr. 1 - 108857277 - 108858340 [-] on Build GRCh38 125
GenBankmRNA HY025074.1 - 1 - 2 298 Chr. 1 - 108857205 - 108858339 [+] on Build GRCh38 125
GenBankmRNA AA608985.1 - 1 - 2 Chr. 1 - 108857292 - 108858340 [-] on Build GRCh38 125

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream AKNA domain containing 1 AKNAD1 C1orf62 Anti-sense Chr. 1 - 108815898 - 108858242 on NCBI Build GRCh38
Downstream G-protein signaling modulator 2 GPSM2 CMCS,
DFNB82,
LGN,
PINS 		17.1kb Sense Chr. 1 - 108875350 - 108934335 on NCBI Build GRCh38

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More Information


Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009332.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000935.hg.1

Set Membership:

 Amplicon length greater than or equal to 101 3' Most Homo sapiens Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina


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