Name: [Hs04274457_m1] [LINC01289]
Creator: Thermo Fisher Scientific
Keywords: [LINC01289] Assay, [long intergenic non-protein coding RNA 1289] Assay

Assay Details

Gene Symbol: LINC01289
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038875.2		1 - 2	416		132
GenBank mRNA	BC037345.2	-	1 - 2	415		131

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AL705333.1	-	1 - 2	388		Chr. 8 - 63769458 - 63778746 [+] on Build GRCh38	132
GenBankmRNA	BI458759.1	-	1 - 2	420		Chr. 8 - 63769430 - 63778740 [+] on Build GRCh38	132

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC102724612	LOC102724612		-293.9kb	Sense	Chr. 8 - 63465849 - 63475482 on NCBI Build GRCh38
Downstream	uncharacterized LOC102724623	LOC102724623		76.0kb	Anti-sense	Chr. 8 - 63856943 - 64368558 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800012304.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000429.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08005960.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08005960.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08005960.hg.1	TC08000429.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08005959.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08005959.hg.1	NR_038875.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08005959.hg.1	TC08000429.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	TC0800012304.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185376.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185376.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185376.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800185376.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185376.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185379.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185379.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185379.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800185379.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185379.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185380.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185380.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185380.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800185380.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185380.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185378.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185378.hg.1	NR_038875.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800185378.hg.1	TC0800012304.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800185378.hg.1	ENST00000519550.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800185378.hg.1	NR_038875.2	Refseq

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Catalog #	4426961
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Genomic Map