Name: [Hs04275670_s1] [SH3PXD2A-AS1]
Creator: Thermo Fisher Scientific
Keywords: [SH3PXD2A-AS1] Assay, [SH3PXD2A antisense RNA 1] Assay

Assay Details

Gene Symbol: SH3PXD2A-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038940.1		3	1414		94

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CA412163.1	-	2			Chr. 10 - 103754622 - 103760682 [-] on Build GRCh38	94
GenBankmRNA	BX327742.2	-	1	563		Chr. 10 - 103754248 - 103755127 [+] on Build GRCh38	94

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH3 and PX domains 2A	SH3PXD2A	FISH, SH3MD1, TKS5		Anti-sense	Chr. 10 - 103594027 - 103855464 on NCBI Build GRCh38
Downstream	oligonucleotide/oligosaccharide binding fold containing 1	OBFC1	AAF-44, AAF44, RPA-32, STN1, bA541N10.2	114.8kb	Anti-sense	Chr. 10 - 103856811 - 103918287 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000008790.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000778.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10009271.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009271.hg.1	TC10000778.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10009272.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009272.hg.1	TC10000778.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009270.hg.1	NR_038940.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009270.hg.1	TC10000778.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	TC1000008790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160139.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	TC1000008790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160140.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160138.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160138.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160138.hg.1	TC1000008790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000160138.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160138.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160142.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160142.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160142.hg.1	TC1000008790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000160142.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160142.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	TC1000008790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000160141.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000625265.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	ENST00000627886.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	NR_038940.1	Refseq
Affymetrix Human Clariom D Assay	TC1000008790.hg.1	NR_038940.1	Refseq
Human Genome U133 Plus 2.0 Array	1557389_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1557389_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1557389_at8	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map