Assay Details

Gene Symbol: PTOV1-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040037.1		4	2021		113
GenBank mRNA	BC043359.1	-	4	2021		113

Gene Symbol: MED25
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_011527353.1	XP_011525655.1	18			113

Interrogated Sequence		Translated Protein	Exon Boundary	Transcript Location	Amplicon Length
GenBankmRNA	CN284979.1	-	1	Chr. 19 - 49838537 - 49839326 [+] on Build GRCh38	113
GenBankmRNA	BU169402.1	-	1	Chr. 19 - 49838602 - 49839334 [+] on Build GRCh38	113
GenBankmRNA	BE154251.1	-	1	Chr. 19 - 49838533 - 49839095 [+] on Build GRCh38	113
GenBankmRNA	BM564251.1	-	3	Chr. 19 - 49835845 - 49839354 [+] on Build GRCh38	113
GenBankmRNA	AW872394.1	-	1	Chr. 19 - 49838647 - 49839145 [+] on Build GRCh38	113

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 6800	MIR6800	hsa-mir-6800	-6.5kb	Anti-sense	Chr. 19 - 49832018 - 49832099 on NCBI Build GRCh38
Downstream	prostate tumor overexpressed 1	PTOV1	ACID2, PTOV-1	8.8kb	Anti-sense	Chr. 19 - 49850726 - 49860744 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900011165.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19001726.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19023566.hg.1	TC19001726.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023566.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023564.hg.1	TC19001726.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023564.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023563.hg.1	TC19001726.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023563.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023565.hg.1	TC19001726.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023565.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193595.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193596.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193596.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193596.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193596.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193596.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193592.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193592.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193592.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193592.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193592.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193599.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193599.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193599.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193599.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193599.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011165.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	ENST00000600742.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193593.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193597.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193597.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193597.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193597.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193597.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193603.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193603.hg.1	NR_040037.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900193603.hg.1	TC1900011165.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900193603.hg.1	ENST00000596521.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900193603.hg.1	NR_040037.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1830842	AK092213.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1830842	BC043359.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1830842	NR_040037.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1830842	AK092213.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1830842	BC043359.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1830842	NR_040037.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1830842	AK092213.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1830842	BC043359.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1830842	NR_040037.1	human_transcriptome
Illumina Sentrix Human-6 v2 Expression BeadChip	5260050	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_117725	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1830842	AK092213.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1830842	BC043359.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1830842	NR_040037.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1830842	AK092213.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1830842	BC043359.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1830842	NR_040037.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1830842	AK092213.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1830842	BC043359.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1830842	NR_040037.1	human_transcriptome

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P21028654	-	-
Agilent Human 1B Microarray G4111A	A_32_P753489	-	-
Agilent Human 1B Microarray G4111A	A_32_P7426	-	-
Agilent Human 1B Microarray G4111A	A_32_P378673	-	-
Agilent Human 1B Microarray G4111A	A_32_P803469	-	-

System Message

Genomic Map