Assay Details

Gene Symbol: LOC100294145
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037178.1		1 - 2	754		93

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA002236.1	-	1 - 2	142	Chr. 6 - 32894788 - 32901364 [+] on Build GRCh38	93
GenBankmRNA	DA887632.1	-	1 - 2	207	Chr. 6 - 32894723 - 32901245 [+] on Build GRCh38	93
GenBankmRNA	CN422308.1	-	1 - 2	162	Chr. 6 - 32894767 - 32901514 [+] on Build GRCh38	93
GenBankmRNA	DA956331.1	-	1 - 2	165	Chr. 6 - 32894765 - 32901323 [+] on Build GRCh38	93
GenBankmRNA	BG759093.1	-	1 - 2	618	Chr. 6 - 32894310 - 32900988 [+] on Build GRCh38	93
GenBankmRNA	BI911459.1	-	1 - 2	210	Chr. 6 - 32894754 - 32901398 [+] on Build GRCh38	93
GenBankmRNA	CD103122.1	-	1 - 2	116	Chr. 6 - 32894815 - 32901527 [+] on Build GRCh38	93
GenBankmRNA	CN422312.1	-	1 - 2	117	Chr. 6 - 32894819 - 32901610 [+] on Build GRCh38	93
GenBankmRNA	CN481065.1	-	1 - 2	151	Chr. 6 - 32894779 - 32901282 [+] on Build GRCh38	93
GenBankmRNA	BE792177.1	-	1 - 2	86	Chr. 6 - 32894843 - 32901648 [+] on Build GRCh38	93
GenBankmRNA	DA819052.1	-	1 - 2	116	Chr. 6 - 32894814 - 32901371 [+] on Build GRCh38	93
GenBankmRNA	CN422310.1	-	1 - 2	189	Chr. 6 - 32894752 - 32901322 [+] on Build GRCh38	93
GenBankmRNA	DA953327.1	-	1 - 2	116	Chr. 6 - 32894814 - 32901369 [+] on Build GRCh38	93
GenBankmRNA	DA665799.1	-	1 - 2	142	Chr. 6 - 32894788 - 32901331 [+] on Build GRCh38	93
GenBankmRNA	DA489636.1	-	1 - 2	207	Chr. 6 - 32894723 - 32901307 [+] on Build GRCh38	93
GenBankmRNA	HY017734.1	-	1 - 2	202	Chr. 6 - 32894730 - 32901190 [+] on Build GRCh38	93
GenBankmRNA	EL952939.1	-	1 - 2	103	Chr. 6 - 32894843 - 32901348 [+] on Build GRCh38	93
GenBankmRNA	BI917524.1	-	1 - 2	287	Chr. 6 - 32894642 - 32901374 [+] on Build GRCh38	93
GenBankmRNA	DA389293.1	-	1 - 2	113	Chr. 6 - 32894817 - 32901385 [+] on Build GRCh38	93
GenBankmRNA	BQ423167.1	-	1 - 2	146	Chr. 6 - 32894784 - 32901599 [+] on Build GRCh38	93
GenBankmRNA	DA791406.1	-	1 - 2	211	Chr. 6 - 32894719 - 32901259 [+] on Build GRCh38	93
GenBankmRNA	DB144388.1	-	1 - 2	116	Chr. 6 - 32894814 - 32901342 [+] on Build GRCh38	93
GenBankmRNA	DW423237.1	-	1 - 2	187	Chr. 6 - 32894760 - 32900989 [+] on Build GRCh38	93
GenBankmRNA	AL600227.1	-	1 - 2	154	Chr. 6 - 32894776 - 32901087 [+] on Build GRCh38	93
GenBankmRNA	DA439360.1	-	1 - 2	171	Chr. 6 - 32894760 - 32901311 [+] on Build GRCh38	94
GenBankmRNA	DA953339.1	-	1 - 2	116	Chr. 6 - 32894814 - 32901366 [+] on Build GRCh38	93
GenBankmRNA	DA883036.1	-	1 - 2	116	Chr. 6 - 32894814 - 32901369 [+] on Build GRCh38	93
GenBankmRNA	BQ929333.1	-	1 - 2	150	Chr. 6 - 32894780 - 32901695 [+] on Build GRCh38	93
GenBankmRNA	BU184070.1	-	1 - 2	206	Chr. 6 - 32894735 - 32901623 [+] on Build GRCh38	93
GenBankmRNA	BX345430.2	-	1 - 2	168	Chr. 6 - 32894762 - 32901645 [+] on Build GRCh38	93

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1	PPP1R2P1	IPP-2P, PPP1R2P	-14.1kb	Anti-sense	Chr. 6 - 32876475 - 32880074 on NCBI Build GRCh38
Downstream	major histocompatibility complex, class II, DM beta	HLA-DMB	D6S221E, RING7	30.9kb	Anti-sense	Chr. 6 - 32934629 - 32941070 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007671.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000405.hg.1, TC6_apd_hap1000049.hg.1, TC6_cox_hap2000096.hg.1, TC6_dbb_hap3000089.hg.1, TC6_mann_hap4000080.hg.1, TC6_mcf_hap5000081.hg.1, TC6_qbl_hap6000087.hg.1, TC6_ssto_hap7000082.hg.1

Set Membership:

Amplicon length between 86 and 100

Homo sapiens

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24842009	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24841999	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24842003	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15802815	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648781	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24841995	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648794	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24841993	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648791	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648777	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15802813	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24842000	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648786	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648799	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648800	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648797	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P24842005	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648779	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648776	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648798	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648788	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P04648789	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	41648	-	-
Agilent Human 1B Microarray G4111A	A_32_P469572	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001416.hg.1	TC6_mann_hap4000080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001416.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001416.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001630.hg.1	TC6_ssto_hap7000082.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001630.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001630.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001807.hg.1	TC6_cox_hap2000096.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001807.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001807.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001628.hg.1	TC6_ssto_hap7000082.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001628.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7001628.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001809.hg.1	TC6_cox_hap2000096.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001809.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001809.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000696.hg.1	TC6_apd_hap1000049.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000696.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000696.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001818.hg.1	TC6_dbb_hap3000089.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001818.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001818.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001595.hg.1	TC6_mcf_hap5000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001595.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001595.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001597.hg.1	TC6_mcf_hap5000081.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001597.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001597.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000694.hg.1	TC6_apd_hap1000049.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000694.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000694.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004723.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004723.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004723.hg.1	TC06000405.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06004724.hg.1	ENST00000499196.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004724.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004724.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004724.hg.1	TC06000405.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001770.hg.1	TC6_qbl_hap6000087.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001770.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001770.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001772.hg.1	TC6_qbl_hap6000087.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001772.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001772.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004726.hg.1	ENST00000499196.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06004726.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004726.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06004726.hg.1	TC06000405.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001820.hg.1	TC6_dbb_hap3000089.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001820.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001820.hg.1	NR_037178.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001418.hg.1	TC6_mann_hap4000080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001418.hg.1	NR_037177.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001418.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152963.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152963.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152963.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152969.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152969.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152969.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152972.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152972.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152972.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152973.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152973.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152973.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152968.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152968.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152968.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152964.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152964.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152964.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152966.hg.1	NR_037178.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600152966.hg.1	TC0600007671.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600152966.hg.1	NR_037178.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map