Name: [Hs04332299_g1] [ATP2A1-AS1]
Creator: Thermo Fisher Scientific
Keywords: [ATP2A1-AS1] Assay, [ATP2A1 antisense RNA 1] Assay

Assay Details

Gene Symbol: ATP2A1-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046289.1		1 - 2	380		104
GenBank mRNA	CK823011.1	-	1 - 2			104
GenBank mRNA	CK823012.1	-	1 - 2	379		104

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BQ102438.1	-	1 - 2		Chr. 16 - 28878957 - 28879826 [+] on Build GRCh38	104
GenBankmRNA	BQ086328.1	-	1 - 2	379	Chr. 16 - 28878999 - 28879920 [-] on Build GRCh38	104
GenBankmRNA	BQ102405.1	-	1 - 2		Chr. 16 - 28878957 - 28879901 [+] on Build GRCh38	104
GenBankmRNA	HY369728.1	-	1 - 2		Chr. 16 - 28878958 - 28879781 [+] on Build GRCh38	104
GenBankmRNA	BQ086372.1	-	1 - 2	379	Chr. 16 - 28878979 - 28879920 [-] on Build GRCh38	104
GenBankmRNA	BM128727.1	-	1 - 2	363	Chr. 16 - 28878999 - 28879904 [-] on Build GRCh38	104
GenBankmRNA	HY174453.1	-	1 - 2	396	Chr. 16 - 28879021 - 28879935 [-] on Build GRCh38	104
GenBankmRNA	BM128480.1	-	1 - 2		Chr. 16 - 28878957 - 28879900 [+] on Build GRCh38	104

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH2B adaptor protein 1	SH2B1	PSM, SH2B	-4.7kb	Anti-sense	Chr. 16 - 28846600 - 28874213 on NCBI Build GRCh38
Downstream	rabaptin, RAB GTPase binding effector protein 2	RABEP2	FRA	24.5kb	Sense	Chr. 16 - 28904421 - 28925211 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600009887.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009887.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	TC1600009887.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176083.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	TC1600009887.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176079.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046290.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	TC1600009887.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000561547.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	ENST00000566956.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046287.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046288.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046289.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600176082.hg.1	NR_046290.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map