Name: [Hs04332307_m1] [RNF165]
Creator: Thermo Fisher Scientific
Keywords: [RNF165] Assay, [ring finger protein 165] Assay

Assay Details

Gene Symbol: RNF165
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046357.1		1 - 2	114		85
GenBank mRNA	DA077941.1	-	1 - 2	97		85

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AL583560.3	-	1 - 2	67	Chr. 18 - 46334278 - 46336680 [+] on Build GRCh38	85
GenBankmRNA	BI822339.1	-	1 - 2	74	Chr. 18 - 46334263 - 46336661 [+] on Build GRCh38	84
GenBankmRNA	DR001562.1	-	1 - 2	111	Chr. 18 - 46334234 - 46336448 [+] on Build GRCh38	85

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromosome 18 open reading frame 25	C18orf25	ARKL1, RNF111L1	-67.2kb	Sense	Chr. 18 - 46173553 - 46266992 on NCBI Build GRCh38
Downstream	lipoxygenase homology domains 1	LOXHD1	DFNB77, LH2D1	139.3kb	Anti-sense	Chr. 18 - 46476961 - 46657115 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800007220.hg.1

Set Membership:

Amplicon length between 71 and 85

Homo sapiens

1700

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1800149557.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149557.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149557.hg.1	TC1800007220.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149557.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149557.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000269439.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000543885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000586604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NM_001256758.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NM_152470.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	TC1800007220.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000269439.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000543885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000586604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NM_001256758.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NM_152470.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800149549.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000269439.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000543885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000586604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NM_001256758.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NM_152470.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	TC1800007220.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000269439.11	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000543885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000586604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NM_001256758.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NM_152470.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800149550.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	TC1800007220.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149556.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	NR_046357.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	TC1800007220.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000587853.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000588679.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	ENST00000590330.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800149555.hg.1	NR_046357.1	Refseq

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Catalog #	4426961
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Genomic Map