Assay Details

Gene Symbol: MIR6880
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_106940.1		1	32		58

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	filamin-interacting protein FAM101A	ZNF664-FAM101A		-21.2kb	Anti-sense	Chr. 12 - 123973215 - 124316024 on NCBI Build GRCh38
Downstream	scavenger receptor class B member 1	SCARB1	CD36L1, CLA-1, CLA1, HDLQTL6, SR-BI, SRB1	440.4kb	Sense	Chr. 12 - 124777628 - 124863973 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1200012309.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200012309.hg.1	ENST00000622851.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012309.hg.1	NR_106940.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012309.hg.1	ENST00000622851.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012309.hg.1	NR_106940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200196504.hg.1	ENST00000622851.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200196504.hg.1	NR_106940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200196504.hg.1	TC1200012309.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200196504.hg.1	NR_106940.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200196504.hg.1	ENST00000622851.1	Ensembl

System Message

Genomic Map