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          • Home
          • › Search Tool
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          • › Hs04404247_m1
          See other LIG1 GE Assays ›
          Gene Symbol:
          LIG1
          Gene Name:
          DNA ligase 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.19: 48115445 - 48170603 on Build GRCh38
          Species:
          Human
          Species Specific ID (Flybase ID):
          -
          Assay ID Hs04404247_m1
          Size
          Availability Made To Order
          Catalog # 4426961
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: LIG1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NR_110296.1 24 - 25 3800 80
          NR_135497.1 24 - 25 3803 80
          NR_135498.1 22 - 23 3632 80
          NR_135499.1 23 - 24 3713 80
          NR_135500.1 24 - 25 3980 80
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
          GenBankmRNA W17179.1 - 50 Chr. - - [-] on Build 80

          Adjacent Gene Details

          Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
          Upstream phospholipase A2 group IVC PLA2G4C CPLA2-gamma -8.3kb Sense Chr. 19 - 48047843 - 48111445 on NCBI Build GRCh38
          Downstream chromosome 19 open reading frame 68 C19orf68 49.3kb Anti-sense Chr. 19 - 48170662 - 48197621 on NCBI Build GRCh38

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          More Information


          Updated Mapping Information

          This assay targets the same location as Clariom D transcript cluster(s) TC1900011060.hg.1

          Set Membership:

          Amplicon length between 71 and 85 Homo sapiens Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          telomere maintenance via recombination
          DNA metabolic process
          DNA repair
          transcription-coupled nucleotide-excision repair
          base-excision repair
          nucleotide-excision repair, DNA gap filling
          mismatch repair
          anatomical structure morphogenesis
          V(D)J recombination
          DNA ligation involved in DNA repair
          cell division
          DNA biosynthetic process
          Okazaki fragment processing involved in mitotic DNA replication
          DNA binding
          DNA ligase activity
          DNA ligase (ATP) activity
          ATP binding
          metal ion binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000263274.11 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000427526.6 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000536218.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000594067.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000594759.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000601091.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000613670.4 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_000234.2 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_001289063.1 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_001289064.1 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NR_110296.1 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 TC1900011060.hg.1 Clariom D TC
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000594067.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000263274.11 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000427526.6 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000536218.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000594759.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000601091.5 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 ENST00000613670.4 Ensembl
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_000234.2 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_001289063.1 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NM_001289064.1 Refseq
          Affymetrix Human Clariom D Assay PSR1900192269.hg.1 NR_110296.1 Refseq

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