Name: [Hs04409233_s1] [LOC101929427]
Creator: Thermo Fisher Scientific
Keywords: [LOC101929427] Assay, [uncharacterized LOC101929427] Assay

Assay Details

Gene Symbol: LOC101929427
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_120532.1		2	320		96
RefSeq	NR_120533.1		2	254		96
GenBank mRNA	AA573248.1	-	1			96
GenBank mRNA	BX093338.1	-	2	254		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BG189782.1	-	1	179	Chr. 11 - 126681799 - 126682114 [+] on Build GRCh38	96
GenBankmRNA	BG205680.1	-	1	148	Chr. 11 - 126681804 - 126682114 [+] on Build GRCh38	96
GenBankmRNA	BG212509.1	-	1	175	Chr. 11 - 126681810 - 126682114 [+] on Build GRCh38	96
GenBankmRNA	AV685366.1	-		253	Chr. - - [-] on Build	96
GenBankmRNA	AI160174.1	-	1		Chr. 11 - 126656119 - 126682104 [-] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	kin of IRRE like 3 (Drosophila)	KIRREL3	KIRRE, MRD4, NEPH2, PRO4502		Anti-sense	Chr. 11 - 126423493 - 127003460 on NCBI Build GRCh38
Downstream	KIRREL3 antisense RNA 2	KIRREL3-AS2		258.6kb	Sense	Chr. 11 - 126940746 - 126945090 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100009459.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	NR_120533.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009459.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171181.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171181.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171181.hg.1	TC1100009459.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100171181.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171181.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171180.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171180.hg.1	TC1100009459.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100171180.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	TC1100009459.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171183.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171182.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171182.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100171182.hg.1	TC1100009459.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100171182.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100171182.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	ENST00000534620.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	ENST00000550747.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	NR_120532.1	Refseq
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	NR_120533.1	Refseq
Affymetrix Human Clariom D Assay	TC1100009459.hg.1	NR_120533.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map