Name: [Hs04415877_s1] [CACNA1C-AS2]
Creator: Thermo Fisher Scientific
Keywords: [CACNA1C-AS2] Assay, [CACNA1C antisense RNA 2] Assay

Assay Details

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI267754.1	-	1			Chr. 12 - 2668787 - 2669018 [-] on Build GRCh38	132
GenBankmRNA	AW173240.1	-	1			Chr. 12 - 2668500 - 2669021 [+] on Build GRCh38	132

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CACNA1C intronic transcript 3	CACNA1C-IT3		-379.8kb	Anti-sense	Chr. 12 - 2269776 - 2288745 on NCBI Build GRCh38
Downstream	CACNA1C antisense RNA 1	CACNA1C-AS1		7.0kb	Sense	Chr. 12 - 2676001 - 2691157 on NCBI Build GRCh38

This assay targets the same location as Clariom D transcript cluster(s) TC1200009607.hg.1

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	TC1200009607.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171834.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	TC1200009607.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171835.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	ENST00000545526.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	NR_046579.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009607.hg.1	NR_046579.1	Refseq