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          • Home
          • › Search Tool
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          • › Mm00435491_m1
          See other PAX3 GE Assays ›
          Gene Symbol:
          Pax3
          Gene Name:
          paired box 3
          Gene Aliases:
          Pax-3, Sp, splotch
          Chromosome Location:
          Chr.1: 78101267 - 78197547 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00435491_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pax3
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001159520.1 NP_001152992.1 5 - 6 1181 57
          NM_008781.4 NP_032807.3 5 - 6 1181 57
          GenBank mRNA AK012493.1 - 5 - 6 883 57
          AK014337.1 - 5 - 6 883 57
          AK044985.1 - 5 - 6 886 57
          AK045018.1 - 5 - 6 1182 57
          AK144973.1 - 5 - 6 886 57
          AK147919.1 - 5 - 6 886 57
          AK148354.1 - 5 - 6 1162 57
          AK157760.1 - 5 - 6 883 57
          BC048699.1 - 5 - 6 852 6518115 57
          X59358.1 - 5 - 6 1091 57

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0100002624.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Pax3

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          neural crest cell migration
          neural tube closure
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription by RNA polymerase II
          multicellular organism development
          nervous system development
          heart development
          muscle organ development
          cell population proliferation
          positive regulation of cell population proliferation
          regulation of somitogenesis
          cell migration
          spinal cord association neuron differentiation
          neural tube development
          skeletal muscle cell differentiation
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          developmental pigmentation
          neuron fate commitment
          cardiac muscle cell differentiation
          skeletal muscle organ development
          mammary gland specification
          DNA-binding transcription factor activity, RNA polymerase II-specific
          DNA binding
          chromatin binding
          DNA-binding transcription factor activity
          protein binding
          sequence-specific DNA binding
          HMG box domain binding

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0100021386.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021386.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021386.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021386.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021386.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021390.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021390.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021390.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021390.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021390.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021385.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021385.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021385.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021385.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021385.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021394.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021394.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021394.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021394.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021394.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021389.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021389.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021389.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021389.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021389.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021392.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021392.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021392.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021392.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021392.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021393.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021393.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021393.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021393.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021393.mm.1 NM_008781.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021391.mm.1 TC0100002624.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100021391.mm.1 NM_001159520.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021391.mm.1 NM_001159520.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021391.mm.1 NM_008781.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100021391.mm.1 NM_008781.4 Refseq
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 325761 - -

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          Host server : magellan-search-74594944d-pk6zc:80/100.66.130.62:80.
          git-commit: ab2b2261c2971e97b1ae408e3ad10520b8413932
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.31.0-2025.06.23-1.0