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          • Home
          • › Search Tool
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          • › Mm00437297_m1
          See other VDR GE Assays ›
          Gene Symbol:
          Vdr
          Gene Name:
          vitamin D receptor
          Gene Aliases:
          Nr1i1
          Chromosome Location:
          Chr.15: 97854427 - 97908296 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00437297_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information
          • Citations (1)

          Genomic Map

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          Assay Details

          Gene Symbol: Vdr
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_009504.4 NP_033530.2 3 - 4 289 95
          GenBank mRNA AK030339.1 - 3 - 4 290 95
          AK154647.1 - 3 - 4 264 95
          AK156789.1 - 3 - 4 305 95
          BC006716.1 - 3 - 4 255 3710866 95
          CT010294.1 - 1 - 2 149 95
          D31969.1 - 3 - 4 257 95

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1500002159.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Nuclear Receptor Mammalian Gene Collection Recommended Assay Mus musculus Mouse Estrogen Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Vdr

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          cell morphogenesis
          skeletal system development
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription from RNA polymerase II promoter
          transcription from RNA polymerase II promoter
          calcium ion transport
          cellular calcium ion homeostasis
          multicellular organism development
          lactation
          negative regulation of cell proliferation
          organ morphogenesis
          positive regulation of gene expression
          negative regulation of keratinocyte proliferation
          positive regulation of vitamin D 24-hydroxylase activity
          intracellular receptor signaling pathway
          bile acid signaling pathway
          steroid hormone mediated signaling pathway
          positive regulation of keratinocyte differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          intestinal absorption
          regulation of calcium ion transport
          positive regulation of apoptotic process involved in mammary gland involution
          regulation of calcidiol 1-monooxygenase activity
          mammary gland branching involved in pregnancy
          vitamin D receptor signaling pathway
          apoptotic signaling pathway
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          steroid hormone receptor activity
          RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
          vitamin D binding
          protein binding
          zinc ion binding
          calcitriol receptor activity
          lithocholic acid receptor activity
          sequence-specific DNA binding
          metal ion binding
          retinoid X receptor binding
          vitamin D response element binding
          calcitriol binding
          lithocholic acid binding

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1500017439.mm.1 NM_009504.4.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1500017439.mm.1 NM_009504.4 Refseq
          Affymetrix Mouse Clariom S Array PSR1500017439.mm.1 TC1500002159.mm.1 MTA TC
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 888897 - -

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          Citations (1)

          Complex role of the vitamin D receptor and its ligand in adipogenesis in 3T3-L1 cells.
          Authors
          Blumberg JM, Tzameli I, Astapova I, Lam FS, Flier JS, Hollenberg AN
          Journal
          J Biol Chem - Page No 11205 (Fri Apr 21 00:00:00 EDT 2006)
          Volume (Year)
          281 (2006)
          Product Usage
          -

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