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          • › Mm00476197_g1
          See other TRMT2A GE Assays ›
          Gene Symbol:
          Trmt2a
          Gene Name:
          TRM2 tRNA methyltransferase 2A
          Gene Aliases:
          Htf9c
          Chromosome Location:
          Chr.16: 18248830 - 18254772 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00476197_g1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Trmt2a
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001080999.2 NP_001074468.1 11 - 12 1966 61
          NM_001081000.2 NP_001074469.1 11 - 12 2013 61
          NM_001195205.1 NP_001182134.1 10 - 11 1849 61
          GenBank mRNA AK034102.1 - 8 - 9 2162 61
          AK080170.1 - 10 - 11 1724 61
          AK133844.1 - 11 - 12 1841 61
          AK134368.1 - 11 - 12 1967 61
          AK146391.1 - 11 - 12 1906 61
          AK150482.1 - 11 - 12 1811 61
          AK151311.1 - 11 - 12 1811 61
          AK151422.1 - 11 - 12 1837 61
          AK151725.1 - 11 - 12 1811 61
          AK151778.1 - 11 - 12 1811 61
          AK152055.1 - 11 - 12 1811 61
          AK152201.1 - 11 - 12 1811 61
          AK152363.1 - 11 - 12 1811 61
          AK152548.1 - 11 - 12 1811 61
          AK152903.1 - 11 - 12 1811 61
          AK153043.1 - 11 - 12 1811 61
          AK153190.1 - 11 - 12 1837 61
          AK186499.1 - 3 - 4 238 61
          BC027431.1 - 10 - 11 2078 3156359 61
          BC038486.1 - 11 - 12 1839 3155739 61
          BC046976.1 - 8 - 9 1681 6337243 61
          X56044.1 - 10 - 11 2410 61

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1600000238.mm.1

          Set Membership:

          Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Detect Genomic DNA Mus musculus Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          RNA processing
          methylation
          nucleotide binding
          rRNA (adenine-N6,N6-)-dimethyltransferase activity
          nucleic acid binding
          RNA binding
          protein C-terminal carboxyl O-methyltransferase activity
          tRNA (guanine-N2-)-methyltransferase activity
          methyltransferase activity
          C-methyltransferase activity
          N-methyltransferase activity
          O-methyltransferase activity
          S-methyltransferase activity
          RNA methyltransferase activity
          mRNA methyltransferase activity
          tRNA methyltransferase activity
          protein methyltransferase activity
          2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
          rRNA methyltransferase activity
          rRNA (uridine-2'-O-)-methyltransferase activity
          rRNA (adenine-N6-)-methyltransferase activity
          DNA-methyltransferase activity
          tRNA (guanine-N1-)-methyltransferase activity
          rRNA (cytosine-C5-)-methyltransferase activity
          selenocysteine methyltransferase activity
          arginine N-methyltransferase activity
          protein-arginine N-methyltransferase activity
          lysine N-methyltransferase activity
          protein-lysine N-methyltransferase activity
          tRNA (uracil) methyltransferase activity
          tRNA (guanine) methyltransferase activity
          tRNA (adenine) methyltransferase activity
          tRNA (cytosine) methyltransferase activity
          tRNA (cytosine-5-)-methyltransferase activity
          tRNA (adenine-N1-)-methyltransferase activity
          rRNA (adenine) methyltransferase activity
          rRNA (cytosine) methyltransferase activity
          rRNA (guanine) methyltransferase activity
          rRNA (uridine) methyltransferase activity
          transferase activity
          protein C-terminal leucine carboxyl O-methyltransferase activity
          1-phenanthrol methyltransferase activity
          protein-arginine N5-methyltransferase activity
          methylarsonite methyltransferase activity
          dimethylarsinite methyltransferase activity
          4,5-dihydroxybenzo(a)pyrene methyltransferase activity
          1-hydroxypyrene methyltransferase activity
          1-hydroxy-6-methoxypyrene methyltransferase activity
          demethylmenaquinone methyltransferase activity
          cobalt-precorrin-6B C5-methyltransferase activity
          cobalt-precorrin-7 C15-methyltransferase activity
          cobalt-precorrin-5B C1-methyltransferase activity
          cobalt-precorrin-3 C17-methyltransferase activity
          dimethylamine methyltransferase activity
          hydroxyneurosporene-O-methyltransferase activity
          tRNA (adenine-57, 58-N(1)-) methyltransferase activity
          methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
          trimethylamine methyltransferase activity
          methanol-specific methylcobalamin:coenzyme M methyltransferase activity
          monomethylamine methyltransferase activity
          P-methyltransferase activity
          Se-methyltransferase activity
          2-phytyl-1,4-naphthoquinone methyltransferase activity
          tRNA (uracil-2'-O-)-methyltransferase activity
          tRNA (cytosine-2'-O-)-methyltransferase activity
          phosphomethylethanolamine N-methyltransferase activity
          tRNA (cytosine-3-)-methyltransferase activity
          rRNA (cytosine-2'-O-)-methyltransferase activity
          rRNA (cytosine-N4-)-methyltransferase activity
          trihydroxyferuloyl spermidine O-methyltransferase activity

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 710150 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 968089 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 760090 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2031337 X56044.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2031337 BC046976.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2031337 BY650649.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2031337 BC038486.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_55_P2031337 AK080170.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P665404 AK017819.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P387648 X56044.1 mouse_transcriptome
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12712418 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12712436 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12712440 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P12712424 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578623 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578618 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578629 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578610 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578595 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578630 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578612 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578614 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578613 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578627 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578598 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578621 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578607 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578635 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578634 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578605 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578593 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578616 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578609 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578601 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578625 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578603 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578597 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P30578632 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578634 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12886780 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12886748 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12712436 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578610 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578630 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578635 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12712428 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578622 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578595 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578614 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578612 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578623 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578625 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12886779 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578616 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578618 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578603 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578632 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578627 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12886796 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P12886767 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578609 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P30578598 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10434153 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434160 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434164 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434156 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434152 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434163 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434155 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434158 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434150 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434154 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434162 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434161 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434157 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434149 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434151 - -
          Affymetrix Mouse Gene 1.0 ST Array 10434159 - -
          Affymetrix HT MG-430 PM Array Plate 1457620_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1453995_PM_a_at - -
          Affymetrix HT MG-430 PM Array Plate 1448114_PM_a_at - -
          Affymetrix HT MG-430 PM Array Plate 1448115_PM_at - -
          Affymetrix HT MG-430 PM Array Plate 1441920_PM_x_at - -
          Affymetrix HT MG-430 PM Array Plate 1434244_PM_x_at - -
          Affymetrix Mouse Gene 1.1 ST Array 10434148 - -
          Mouse Genome 430 2.0 Array 1453995_PM_a_at - -
          Mouse Genome 430 2.0 Array 1448115_PM_at - -
          Mouse Genome 430 2.0 Array 1441920_PM_x_at - -
          Mouse Genome 430 2.0 Array 1448114_PM_a_at - -
          Mouse Genome 430 2.0 Array 1448114_a_at - -
          Mouse Genome 430 2.0 Array 1457620_at - -
          Mouse Genome 430 2.0 Array 1457620_PM_at - -
          Mouse Genome 430 2.0 Array 1453995_a_at - -
          Mouse Genome 430 2.0 Array 1441920_x_at - -
          Mouse Genome 430 2.0 Array 1434244_x_at - -
          Mouse Genome 430 2.0 Array 1448115_at - -
          Mouse Genome 430 2.0 Array 1434244_PM_x_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 15547_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 15547_at - -
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 TC1600000238.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001080999.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001080999.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001081000.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001081000.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001195205.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002143.mm.1 NM_001195205.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 TC1600000238.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001080999.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001080999.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001081000.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001081000.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001195205.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002150.mm.1 NM_001195205.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 TC1600000238.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001080999.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001080999.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001081000.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001081000.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001195205.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002145.mm.1 NM_001195205.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 TC1600000238.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001080999.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001080999.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001081000.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001081000.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001195205.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002140.mm.1 NM_001195205.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 TC1600000238.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001080999.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001080999.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001081000.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001081000.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001195205.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1600002144.mm.1 NM_001195205.1 Refseq
          Mouse Expression Set 430 1453995_a_at - -
          Mouse Expression Set 430 1434244_PM_x_at - -
          Mouse Expression Set 430 1453995_PM_a_at - -
          Mouse Expression Set 430 1448115_at - -
          Mouse Expression Set 430 1448114_PM_a_at - -
          Mouse Expression Set 430 1448114_a_at - -
          Mouse Expression Set 430 1434244_x_at - -
          Mouse Expression Set 430 1448115_PM_at - -
          Mouse Expression Set 430 1441920_x_at - -
          Mouse Expression Set 430 1441920_PM_x_at - -
          Mouse Expression Set 430 1457620_PM_at - -
          Mouse Expression Set 430 1457620_at - -
          Murine Genome U74v2 Set 100525_at - -
          Murine Genome U74v2 Set 100525_PM_at - -
          Mouse Genome 430A 2.0 Array 1453995_a_at - -
          Mouse Genome 430A 2.0 Array 1448114_PM_a_at - -
          Mouse Genome 430A 2.0 Array 1448115_at - -
          Mouse Genome 430A 2.0 Array 1434244_PM_x_at - -
          Mouse Genome 430A 2.0 Array 1434244_x_at - -
          Mouse Genome 430A 2.0 Array 1453995_PM_a_at - -
          Mouse Genome 430A 2.0 Array 1448114_a_at - -
          Mouse Genome 430A 2.0 Array 1448115_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1434244_x_at - -
          Affymetrix HT Mouse Genome 430A Array 1448115_at - -
          Affymetrix HT Mouse Genome 430A Array 1448114_PM_a_at - -
          Affymetrix HT Mouse Genome 430A Array 1448115_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1434244_PM_x_at - -
          Affymetrix HT Mouse Genome 430A Array 1453995_PM_a_at - -
          Affymetrix HT Mouse Genome 430A Array 1453995_a_at - -
          Affymetrix HT Mouse Genome 430A Array 1448114_a_at - -
          Affymetrix HT Mouse Genome 430B Array 1457620_PM_at - -
          Affymetrix HT Mouse Genome 430B Array 1441920_PM_x_at - -
          Affymetrix HT Mouse Genome 430B Array 1457620_at - -
          Affymetrix HT Mouse Genome 430B Array 1441920_x_at - -
          Array Name Probe IDs Targets Target Type
          Illumina mouseRef-8 v1.1 expression beadchip ILMN_2682887 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_2682887 - -
          MouseRef-8 v2 Expression BeadChip ILMN_3143116 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_3143116 - -

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          git-commit: ab2b2261c2971e97b1ae408e3ad10520b8413932
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