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          • Home
          • › Search Tool
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          • › Mm00513637_m1
          See other DDX41 GE Assays ›
          Gene Symbol:
          Ddx41
          Gene Name:
          DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
          Gene Aliases:
          2900024F02Rik, AA958953, ABS, AI324246
          Chromosome Location:
          Chr.13: 55530410 - 55536658 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00513637_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ddx41
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_134059.2 NP_598820.2 6 - 7 725 77
          GenBank mRNA AK151427.1 - 6 - 7 599 77
          AK156957.1 - 6 - 7 593 77
          AK168043.1 - 6 - 7 598 77
          AK186868.1 - 1 - 2 45 77
          AK214152.1 - 1 - 2 45 77
          BC011308.1 - 6 - 7 579 3256762 77
          BC023711.1 - 6 - 7 599 78

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1300002063.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ddx41

          Gene Ontology Categories:

          Function(s) Process(es)

          mRNA processing
          RNA splicing
          RNA secondary structure unwinding
          cellular response to interferon-beta
          positive regulation of transcription by RNA polymerase II
          defense response to virus
          nucleotide binding
          nucleic acid binding
          DNA binding
          RNA binding
          RNA helicase activity
          helicase activity
          protein binding
          ATP binding
          zinc ion binding
          hydrolase activity
          metal ion binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055657 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055655 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055656 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055658 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055652 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055659 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055654 - -
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 40530 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 9304 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 164177 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 875163 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 143993 - -
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P140221 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P345927 BC011308.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055650 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055657 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055625 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055634 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055674 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055675 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055611 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055654 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055641 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055622 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055662 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055647 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055615 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055660 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055642 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055651 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055666 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055631 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055665 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055612 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055638 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055656 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055670 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055610 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055643 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055635 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055628 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055652 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055619 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055626 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055646 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055671 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055663 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055609 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055649 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055640 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055673 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055661 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055669 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055630 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055659 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P29055617 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P140221 - -
          Whole Mouse Genome G4122A A_51_P345927 BC011308.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P345927 BC011308.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P136380 - -
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P122116 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P140221 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019720 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019728 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019742 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019739 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019721 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P11019740 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055654 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055655 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055652 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055658 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055657 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055656 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P29055659 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055657 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055619 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055632 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055610 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055565 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055628 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055548 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055646 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055666 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055609 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055660 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055569 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055595 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055647 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055671 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055634 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055635 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055650 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055661 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055571 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055654 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055649 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055567 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055669 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055588 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055638 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055652 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055656 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055659 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055590 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055631 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055641 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055558 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055585 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055546 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055625 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055662 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055554 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055579 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055581 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055575 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055674 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055615 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055621 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055642 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055663 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055605 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055670 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055561 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055607 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055562 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055598 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055665 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055582 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055602 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055675 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055594 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055604 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055667 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055555 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055617 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055584 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055568 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055651 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055640 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P29055586 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11048848 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055610 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055646 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055635 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055621 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055650 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055659 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055627 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055651 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055628 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055612 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055657 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055647 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055619 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055640 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055609 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055662 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055663 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055656 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055665 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055631 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055625 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055661 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055652 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11048841 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055675 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055643 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P10507838 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055660 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055641 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11048844 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P10969887 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055615 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055669 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055654 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055667 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P11048834 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055649 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055617 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055666 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055670 - -
          Agilent Six_ChIP_03_of_03_v2 A_68_P29055644 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10409521 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409510 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409515 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409509 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409512 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409511 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409519 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409514 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409513 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409524 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409525 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409522 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409518 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409523 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409520 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409517 - -
          Affymetrix Mouse Gene 1.0 ST Array 10409516 - -
          Affymetrix HT MG-430 PM Array Plate 1423814_PM_at - -
          Affymetrix Mouse Gene 1.1 ST Array 10409508 - -
          Mouse Genome 430 2.0 Array 1423814_at - -
          Mouse Genome 430 2.0 Array 1423814_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 72935_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 72935_at - -
          Affymetrix Mouse Clariom S Array PSR1300013078.mm.1 TC1300002063.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1300013078.mm.1 NM_134059.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1300013078.mm.1 NM_134059.2 Refseq
          Murine Genome U74v2 Set 160663_at - -
          Murine Genome U74v2 Set 160663_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1423814_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1423814_at - -
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 863741 - -
          Array Name Probe IDs Targets Target Type
          MouseWG-6 v2 Expression BeadChip 380324 - -
          Illumina mouse-6 v1.0 expression beadchip 380324 - -
          Illumina mouse-6 v1.0 expression beadchip 106420170 - -
          Illumina mouseRef-8 v1.0 expression beadchip 0000380324 - -
          Illumina mouseRef-8 v1.1 expression beadchip ILMN_1224598 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1224598 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_2547260 - -
          mouse-6 v1.1 (Illumina) scl43919.15.1_45-S - -
          Illumina Sentrix mouse-6.v1 bead array 380324 - -
          Illumina Sentrix mouse-6.v1 bead array 106420170 - -
          Illumina Sentrix MouseRef-8 Expression BeadChip scl43919.15.1_45-S - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 380324 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 106420170 - -
          MouseRef-8 v2 Expression BeadChip ILMN_1224598 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2547260 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_1224598 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (3) scl43919.15.1_45-S - -

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          Host server : magellan-search-784b477dbd-pq4vn:80/100.66.130.62:80.
          git-commit: d41a97e986437cfbf980934f14197a4b4d3eb741
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.31.0-2025.06.23-1.0