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Gene Symbol:
Vash2
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm00523117_g1
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Catalog # 4426961
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Assay Details

Gene Symbol: Vash2
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_027352.1 1 - 2 166 73
GenBank mRNA AK045261.1 - 1 - 2 95 73
AK078596.1 - 1 - 2 167 73
AK163193.1 - 1 - 2 75 73
BC024141.1 - 1 - 2 69 5149750 73
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BY150367.1 - 1 - 2 75 Chr. 1 - 190978324 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BY072562.1 - 1 - 2 75 Chr. 1 - 190978289 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BB650651.1 - 1 - 2 63 Chr. 1 - 190966247 - 190979192 [-] on Build GRCm38 73
GenBankmRNA BY789774.1 - 1 - 2 99 Chr. 1 - 190978438 - 190979227 [-] on Build GRCm38 73
GenBankmRNA BQ771226.1 - 1 - 2 140 Chr. 1 - 190978181 - 190979270 [-] on Build GRCm38 73
GenBankmRNA BB643496.1 - 92 Chr. - - [-] on Build 73
GenBankmRNA BQ042184.1 - 1 - 2 60 Chr. 1 - 190960447 - 190979190 [-] on Build GRCm38 73
GenBankmRNA CF736308.1 - 1 - 2 74 Chr. 1 - 190960401 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BQ745599.1 - 1 - 2 85 Chr. 1 - 190966198 - 190979215 [-] on Build GRCm38 73
GenBankmRNA BB623771.1 - 1 - 2 161 Chr. 1 - 190966958 - 190979291 [-] on Build GRCm38 73
GenBankmRNA BU612377.1 - 1 - 2 59 Chr. 1 - 190960446 - 190979189 [-] on Build GRCm38 73
GenBankmRNA CN694582.1 - 1 - 2 54 Chr. 1 - 190978181 - 190979184 [-] on Build GRCm38 73
GenBankmRNA CJ174856.1 - 1 - 2 158 Chr. 1 - 190978301 - 190979288 [-] on Build GRCm38 73
GenBankmRNA BB618765.1 - 1 - 2 85 Chr. 1 - 190972900 - 190979214 [-] on Build GRCm38 73
GenBankmRNA BY072490.1 - 1 - 2 75 Chr. 1 - 190978272 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BB640750.1 - 1 - 2 75 Chr. 1 - 190966914 - 190979204 [-] on Build GRCm38 73
GenBankmRNA CF736588.1 - 1 - 2 71 Chr. 1 - 190960431 - 190979201 [-] on Build GRCm38 73
GenBankmRNA BY125060.1 - 1 - 2 85 Chr. 1 - 190978340 - 190979214 [-] on Build GRCm38 73
GenBankmRNA BY775652.1 - 1 - 2 85 Chr. 1 - 190978308 - 190979214 [-] on Build GRCm38 73
GenBankmRNA BY141587.1 - 1 - 2 98 Chr. 1 - 190978347 - 190979227 [-] on Build GRCm38 73
GenBankmRNA BU701528.1 - 1 - 2 67 Chr. 1 - 190960431 - 190979197 [-] on Build GRCm38 73
GenBankmRNA CN697507.1 - 1 - 2 76 Chr. 1 - 190970453 - 190979206 [-] on Build GRCm38 73
GenBankmRNA CN667706.1 - 1 - 2 148 Chr. 1 - 190978214 - 190979278 [-] on Build GRCm38 73
GenBankmRNA BY150057.1 - 1 - 2 92 Chr. 1 - 190978383 - 190979222 [-] on Build GRCm38 73
GenBankmRNA BY133108.1 - 1 - 2 75 Chr. 1 - 190978265 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BM963403.1 - 1 - 2 61 Chr. 1 - 190960349 - 190979190 [-] on Build GRCm38 73
GenBankmRNA BY130053.1 - 1 - 2 85 Chr. 1 - 190978383 - 190979214 [-] on Build GRCm38 73
GenBankmRNA BY012402.1 - 1 - 2 91 Chr. 1 - 190978288 - 190979221 [-] on Build GRCm38 73
GenBankmRNA BY082830.1 - 1 - 2 138 Chr. 1 - 190978345 - 190979267 [-] on Build GRCm38 73
GenBankmRNA BY145418.1 - 1 - 2 70 Chr. 1 - 190978318 - 190979199 [-] on Build GRCm38 73
GenBankmRNA BY130052.1 - 1 - 2 85 Chr. 1 - 190978384 - 190979214 [-] on Build GRCm38 73
GenBankmRNA CF736795.1 - 1 - 2 59 Chr. 1 - 190966198 - 190979189 [-] on Build GRCm38 73
GenBankmRNA BY766477.1 - 1 - 2 75 Chr. 1 - 190978286 - 190979204 [-] on Build GRCm38 73
GenBankmRNA BU701224.1 - 1 - 2 73 Chr. 1 - 190960431 - 190979203 [-] on Build GRCm38 73

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream angel homolog 2 (Drosophila) Angel2 2610307I21Rik,
5730410O10Rik,
AI845692,
D1Ertd396e,
D1Ertd654e 		-31.2kb Anti-sense Chr. 1 - 190925108 - 190946962 on NCBI Build GRCm38
Downstream major facilitator superfamily domain containing 7B Mfsd7b 9630055N22Rik,
FLVCR,
Flvcr1 		26.5kb Sense Chr. 1 - 191005832 - 191026215 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100003796.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK045261.1, AK078596.1, AK163193.1, BC024141.1 transcripts.

Set Membership:

 Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Mus musculus 1700 Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI


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