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          • Home
          • › Search Tool
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          • › Mm01158259_m1
          See other CTNNA1 GE Assays ›
          Gene Symbol:
          Ctnna1
          Gene Name:
          catenin (cadherin associated protein), alpha 1
          Gene Aliases:
          2010010M04Rik, AA517462, AI988031, Catna1
          Chromosome Location:
          Chr.18: 35118912 - 35254775 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01158259_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ctnna1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_009818.1 NP_033948.1 3 - 4 370 61
          GenBank mRNA AK004623.1 - 3 - 4 328 61
          AK036752.1 - 3 - 4 395 61
          AK148496.1 - 3 - 4 367 61
          AK149721.1 - 3 - 4 387 61
          AK149738.1 - 3 - 4 387 61
          AK159339.1 - 3 - 4 385 61
          AK168635.1 - 3 - 4 395 61
          BC048163.1 - 3 - 4 358 6418358 61
          BC060174.1 - 3 - 4 366 61
          BC068316.1 - 3 - 4 362 30106659 61
          BC105576.1 - 3 - 4 350 3967124 61
          D90362.1 - 3 - 4 361 61
          X59990.1 - 3 - 4 370 61

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1800000306.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ctnna1

          Gene Ontology Categories:

          Function(s) Process(es)

          actin filament organization
          cell adhesion
          establishment or maintenance of cell polarity
          negative regulation of neuroblast proliferation
          gap junction assembly
          cellular protein localization
          regulation of cell population proliferation
          negative regulation of apoptotic process
          apical junction assembly
          positive regulation of smoothened signaling pathway
          protein heterooligomerization
          cellular response to indole-3-methanol
          epithelial cell-cell adhesion
          negative regulation of cell motility
          negative regulation of integrin-mediated signaling pathway
          negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
          positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
          RNA binding
          structural molecule activity
          protein binding
          beta-catenin binding
          vinculin binding
          gamma-catenin binding
          cadherin binding
          actin filament binding

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1800002235.mm.1 TC1800000306.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1800002235.mm.1 NM_009818.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002235.mm.1 NM_009818.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002237.mm.1 TC1800000306.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1800002237.mm.1 NM_009818.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002237.mm.1 NM_009818.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002238.mm.1 TC1800000306.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1800002238.mm.1 NM_009818.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002238.mm.1 NM_009818.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002236.mm.1 TC1800000306.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1800002236.mm.1 NM_009818.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1800002236.mm.1 NM_009818.1 Refseq
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 558799 - -

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