Name: [Mm01169922_m1] [Gm5485]
Creator: Thermo Fisher Scientific
Keywords: [Gm5485] Assay, [predicted gene 5485] Assay

Assay Details

Gene Symbol: Gm5485
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015373.1		3 - 4	217		67
GenBank mRNA	AK078896.1	-	3 - 4	218		67

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AV374024.2	-	2 - 3	269		Chr. 16 - 48399453 - 48412287 [-] on Build GRCm38	67
GenBankmRNA	BB582828.2	-	3 - 4	214		Chr. 16 - 48399450 - 48412413 [-] on Build GRCm38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	developmental pluripotency associated 2	Dppa2	2410088E07Rik, C80932, D19Mgi18, ECAT15-2	-79.9kb	Anti-sense	Chr. 16 - 48310274 - 48319513 on NCBI Build GRCm38
Downstream	microrchidia 1	Morc1	Morc	29.6kb	Anti-sense	Chr. 16 - 48431237 - 48630905 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600001687.mm.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P121502	NR_015373.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P121502	AK078896.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	835450	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	225301	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	482438	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	593644	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	572903	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	BC006871.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	M63725.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	NM_007497.3	refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	XM_001474817.1	refseq_mrna_mouse_XM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	XM_001478226.1	refseq_mrna_mouse_XM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	903915	XM_001479002.1	refseq_mrna_mouse_XM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	498962	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	280552	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	85133	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_66_P121502	NR_015373.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_66_P121502	AK078896.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P121502	NR_015373.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P121502	AK078896.1	mouse_transcriptome
Agilent Six_ChIP_03_of_03_v2	A_68_P30740708	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740640	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740669	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740633	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740600	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740628	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740645	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13007018	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740706	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740584	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740641	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740622	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740593	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740587	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740637	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12946036	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740631	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12555297	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740646	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740676	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740665	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740657	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740597	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740693	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740652	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12940756	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740659	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P13007014	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740647	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740590	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740702	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740680	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740624	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740596	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740671	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740668	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740683	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12807691	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740589	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12948163	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12532775	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740667	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740690	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740692	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740673	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740630	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12673216	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740629	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740654	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740661	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740649	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740699	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12490911	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740642	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740677	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740644	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740679	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12490909	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740595	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740685	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12555306	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12881831	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740599	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740650	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30740687	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1441622_PM_at	-	-
Mouse Genome 430 2.0 Array	1441622_PM_at	-	-
Mouse Genome 430 2.0 Array	1441622_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	433023_PM_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	433023_at	-	-
Affymetrix Mouse Clariom S Array	PSR1600013790.mm.1	TC1600001687.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013790.mm.1	NR_015373.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013790.mm.1	NR_015373.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013792.mm.1	TC1600001687.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013792.mm.1	NR_015373.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013792.mm.1	NR_015373.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013791.mm.1	TC1600001687.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013791.mm.1	NR_015373.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013791.mm.1	NR_015373.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013793.mm.1	TC1600001687.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600013793.mm.1	NR_015373.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600013793.mm.1	NR_015373.1	Refseq
Mouse Expression Set 430	1441622_PM_at	-	-
Mouse Expression Set 430	1441622_at	-	-
Affymetrix HT Mouse Genome 430B Array	1441622_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1441622_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	481679	-	-

Availability	Made To Order
Catalog #	4426961
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Genomic Map