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- Gene Symbol:
-
Scx - Gene Name:
- scleraxis
- Gene Aliases:
- BB114693, Bhlha41, Scl
- Chromosome Location:
- Chr.15: 76456033 - 76459468 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Scx | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_198885.3 | NP_942588.1 | 1 - 2 | 754 | 59 | |
| GenBank mRNA | AB221642.1 | - | 1 - 2 | 590 | 59 | |
| BC062161.1 | - | 1 - 2 | 672 | 30138970 | 59 | |
| S78079.1 | - | 1 - 2 | 754 | 59 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1500000592.mm.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
3' Most
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
mesoderm formation
tissue homeostasis
endochondral ossification
chondrocyte differentiation
heart valve morphogenesis
heart valve formation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
multicellular organism development
positive regulation of cell population proliferation
positive regulation of gene expression
cell differentiation
collagen fibril organization
BMP signaling pathway
positive regulation of collagen biosynthetic process
skeletal muscle cell differentiation
tendon development
tendon cell differentiation
tendon formation
deltoid tuberosity development
negative regulation of apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
cartilage development
regulation of cartilage development
positive regulation of cartilage development
positive regulation of gastrulation
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
protein binding
bHLH transcription factor binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
E-box binding
mesoderm formation
tissue homeostasis
endochondral ossification
chondrocyte differentiation
heart valve morphogenesis
heart valve formation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
multicellular organism development
positive regulation of cell population proliferation
positive regulation of gene expression
cell differentiation
collagen fibril organization
BMP signaling pathway
positive regulation of collagen biosynthetic process
skeletal muscle cell differentiation
tendon development
tendon cell differentiation
tendon formation
deltoid tuberosity development
negative regulation of apoptotic process
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
cartilage development
regulation of cartilage development
positive regulation of cartilage development
positive regulation of gastrulation
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
protein binding
bHLH transcription factor binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
E-box binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348452 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348449 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348455 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348451 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348450 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348454 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348453 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P131338 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P122633 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P126440 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | S78079.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | S78079.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348459 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348442 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348453 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348433 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348419 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348411 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348440 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348456 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348465 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348436 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348455 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348416 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348461 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348463 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348458 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348438 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348449 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348408 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348421 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348441 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348412 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348447 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348460 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348422 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348444 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348431 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348427 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348424 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348428 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348452 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348426 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348410 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P30348437 | - | - |
| Whole Mouse Genome G4122A | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | S78079.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | BC062161.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | NM_198885.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P380432 | AK013456.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P126146 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11875461 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P12035794 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P12035807 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11875456 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348453 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348454 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348451 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348452 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348450 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348449 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30348455 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348537 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348465 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348452 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348426 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348459 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348545 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348422 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348412 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348463 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348458 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348547 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348408 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348428 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348544 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348455 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348456 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348438 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348424 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348542 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348427 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348437 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348444 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348460 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348433 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348540 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348543 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348441 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348419 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348440 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348447 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348410 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348436 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348416 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348431 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348453 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348548 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348461 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348449 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348411 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30348541 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348461 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348438 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348436 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348427 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348465 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348408 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11875449 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12035804 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348441 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348452 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348433 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348424 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348440 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12035791 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348416 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12458466 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348437 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348458 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348412 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348455 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12035817 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12458457 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348447 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348456 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12035805 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11875439 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348431 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348411 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348444 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348449 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30348460 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10424907 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10424908 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10424906 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1428983_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1456291_PM_x_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10424905 | - | - |
| Mouse Genome 430 2.0 Array | 1456291_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1456291_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1428983_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1428983_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 20289_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 20289_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1500004240.mm.1 | TC1500000592.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1500004240.mm.1 | NM_198885.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500004240.mm.1 | NM_198885.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500004242.mm.1 | TC1500000592.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1500004242.mm.1 | NM_198885.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500004242.mm.1 | NM_198885.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500004239.mm.1 | TC1500000592.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1500004239.mm.1 | NM_198885.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500004239.mm.1 | NM_198885.3 | Refseq |
| Mouse Expression Set 430 | 1428983_PM_at | - | - |
| Mouse Expression Set 430 | 1428983_at | - | - |
| Murine Genome U74v2 Set | 161030_at | - | - |
| Murine Genome U74v2 Set | 161030_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1428983_at | - | - |
| Mouse Genome 430A 2.0 Array | 1428983_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1428983_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1428983_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1456291_x_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1456291_PM_x_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 716473 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 130066 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0000130066 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_1226016 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1226016 | - | - |
| mouse-6 v1.1 (Illumina) | scl020289.1_12-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 130066 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl020289.1_12-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 130066 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_1226016 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_1226016 | - | - |
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