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          • Home
          • › Search Tool
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          • › Mm01253707_m1
          See other TRUB1 GE Assays ›
          Gene Symbol:
          Trub1
          Gene Name:
          TruB pseudouridine (psi) synthase homolog 1 (E. coli)
          Gene Aliases:
          2610009I02Rik, 9030425C13Rik, AI448235, BB118943, C76870
          Chromosome Location:
          Chr.19: 57452891 - 57491005 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01253707_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Trub1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_028115.3 NP_082391.1 1 - 2 288 72
          NM_029839.3 NP_084115.2 1 - 2 288 72
          GenBank mRNA AK011362.1 - 1 - 2 283 72
          AK018525.1 - 1 - 2 261 72
          AK031674.1 - 1 - 2 266 72
          AK164095.1 - 1 - 2 259 72
          AK169221.1 - 1 - 2 254 72
          BC039287.1 - 1 - 2 233 72

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1900000814.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Trub1

          Gene Ontology Categories:

          Function(s) Process(es)

          pseudouridine synthesis
          RNA processing
          tRNA modification
          tRNA processing
          RNA modification
          mRNA pseudouridine synthesis
          RNA binding
          pseudouridine synthase activity
          isomerase activity
          pivalyl-CoA mutase activity
          o-hydroxylaminobenzoate mutase activity
          lupeol synthase activity
          beta-amyrin synthase activity
          baruol synthase activity

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1900007160.mm.1 TC1900000814.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1900007160.mm.1 NM_028115.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007160.mm.1 NM_028115.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007160.mm.1 NM_029839.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007160.mm.1 NM_029839.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007161.mm.1 TC1900000814.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1900007161.mm.1 NM_028115.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007161.mm.1 NM_028115.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007161.mm.1 NM_029839.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007161.mm.1 NM_029839.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007162.mm.1 TC1900000814.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1900007162.mm.1 NM_028115.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007162.mm.1 NM_028115.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007162.mm.1 NM_029839.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1900007162.mm.1 NM_029839.3 Refseq
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 785275 - -

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