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Gene Symbol:
Sox5os3
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm01259578_m1
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Catalog # 4426961
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Assay Details

Gene Symbol: Sox5os3
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NR_040519.1 2 - 3 328 66
GenBank mRNA AK006194.1 - 2 - 3 329 66
AK016914.1 - 2 - 3 314 66
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CJ132009.1 - 2 - 3 437 Chr. 6 - 144679702 - 144693584 [+] on Build GRCm38 66
GenBankmRNA BY716593.1 - 2 - 3 314 Chr. 6 - 144672882 - 144693835 [+] on Build GRCm38 66
GenBankmRNA BY706291.1 - 2 - 3 329 Chr. 6 - 144672868 - 144693573 [+] on Build GRCm38 66
GenBankmRNA BU961281.1 - 2 - 3 303 Chr. 6 - 144672896 - 144693569 [+] on Build GRCm38 66
GenBankmRNA CN834653.1 - 330 Chr. - - [-] on Build 66

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream SRY (sex determining region Y)-box 5 Sox5 A730017D01Rik,
AI528773 		Anti-sense Chr. 6 - 143828425 - 144781989 on NCBI Build GRCm38
Downstream branched chain aminotransferase 1,
cytosolic 		Bcat1 BCATc,
Eca39 		300.3kb Anti-sense Chr. 6 - 144993835 - 145076157 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600001703.mm.1

Set Membership:

 Amplicon length less than or equal to 70 3' Most Mus musculus 1700 Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI


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