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- Gene Symbol:
-
Pcdhb11 - Gene Name:
- protocadherin beta 11
- Gene Aliases:
- Pcdhb5E, PcdhbK
- Chromosome Location:
- Chr.18: 37421418 - 37425032 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Pcdhb11 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053136.3 | NP_444366.3 | 1 | 2235 | 125 | |
| GenBank mRNA | AK078189.1 | - | 1 | 2236 | 125 | |
| AK160803.1 | - | 1 | 2205 | 125 | ||
| AY013772.1 | - | 1 | 2034 | 125 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1800000367.mm.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Recommended Assay
Mus musculus
1700
Both primers and probe map within a single exon
|
Matching Ambion siRNAs:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 9978 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 80639 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 49463 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P123985 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628188 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628169 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628186 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628179 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628172 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628168 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628184 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628171 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628189 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628182 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628207 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628177 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628181 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628166 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628204 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628152 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628185 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31628164 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P123985 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P08968157 | - | - |
| Whole Mouse Genome G4122A | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P146865 | AK160803.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P146865 | NM_053136.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P146865 | AK078189.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P120376 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P123985 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13616994 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P14118740 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13616990 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628237 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628166 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628158 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628207 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628131 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628219 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628128 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628176 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628132 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628245 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628160 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628188 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628185 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628130 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628156 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628162 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628249 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628171 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628214 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628149 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628246 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628186 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628209 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628169 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628168 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628177 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628164 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628247 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628217 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628212 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628181 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628243 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628155 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628213 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628153 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31628240 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628204 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628172 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628217 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628188 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628189 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628183 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628185 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628212 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13720829 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628155 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628182 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13616978 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628156 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13616983 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628176 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628181 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628209 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628158 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628169 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628207 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628214 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13616977 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628159 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628166 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628164 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628179 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628219 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13616988 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628160 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628177 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628162 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628213 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31628168 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10455090 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10455091 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10455089 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1456710_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1450270_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10455088 | - | - |
| Mouse Genome 430 2.0 Array | 1450270_at | - | - |
| Mouse Genome 430 2.0 Array | 1456710_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1450270_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1456710_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 93882_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 93882_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1800002840.mm.1 | TC1800000367.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1800002840.mm.1 | NM_053136.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002840.mm.1 | NM_053136.3 | Refseq |
| Mouse Expression Set 430 | 1450270_at | - | - |
| Mouse Expression Set 430 | 1450270_PM_at | - | - |
| Mouse Expression Set 430 | 1456710_PM_at | - | - |
| Mouse Expression Set 430 | 1456710_at | - | - |
| Murine Genome U74v2 Set | 170212_PM_i_at | - | - |
| Murine Genome U74v2 Set | 170212_i_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450270_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450270_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450270_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450270_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1456710_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1456710_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 364158 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 610114 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0000610114 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_1224410 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1224410 | - | - |
| mouse-6 v1.1 (Illumina) | scl52063.1.1_133-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 610114 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl52063.1.1_133-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 610114 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_1224410 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_1224410 | - | - |
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