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- Gene Symbol:
-
Crx - Gene Name:
- cone-rod homeobox
- Gene Aliases:
- Crx1
- Chromosome Location:
- Chr.7: 15865947 - 15879955 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Crx | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001113330.1 | NP_001106801.1 | 3 - 4 | 393 | 66 | |
| NM_007770.4 | NP_031796.1 | 3 - 4 | 421 | 66 | ||
| GenBank mRNA | AK053533.1 | - | 3 - 4 | 363 | 66 | |
| AK139691.1 | - | 3 - 4 | 396 | 66 | ||
| BC016502.1 | - | 3 - 4 | 335 | 4527863 | 66 | |
| U77615.1 | - | 3 - 4 | 374 | 66 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0700002413.mm.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
3' Most
Mammalian Gene Collection
Mus musculus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
multicellular organism development
nervous system development
visual perception
cell differentiation
positive regulation of transcription by RNA polymerase II
response to stimulus
retina development in camera-type eye
RNA polymerase II transcription regulatory region sequence-specific DNA binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
leucine zipper domain binding
sequence-specific DNA binding
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription by RNA polymerase II
multicellular organism development
nervous system development
visual perception
cell differentiation
positive regulation of transcription by RNA polymerase II
response to stimulus
retina development in camera-type eye
RNA polymerase II transcription regulatory region sequence-specific DNA binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
leucine zipper domain binding
sequence-specific DNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 770642 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 799179 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 892245 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 170920 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 93552 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 297518 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 120847 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 133415 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 19969 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 59095 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P123822 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P157350 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P127277 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P127277 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P03808152 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P123822 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P03808153 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P09518578 | - | - |
| Whole Mouse Genome G4122A | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | BC016502.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | AK053533.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | AK139691.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | NM_001113330.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P656628 | NM_007770.4 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P119218 | - | - |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P109760 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P123822 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P127277 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876118 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876142 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876119 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876132 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876152 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876121 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876124 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876150 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876144 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876123 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876137 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876129 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876130 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876143 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876133 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876146 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876153 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876127 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876128 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876147 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876140 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876135 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P32876148 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10560171 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10560169 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10560173 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10560172 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10560170 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1418705_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1449185_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10560168 | - | - |
| Mouse Genome 430 2.0 Array | 1418705_at | - | - |
| Mouse Genome 430 2.0 Array | 1418705_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1449185_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1449185_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 12951_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 12951_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0700021196.mm.1 | TC0700002413.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700021196.mm.1 | NM_001113330.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021196.mm.1 | NM_001113330.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021196.mm.1 | NM_007770.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021196.mm.1 | NM_007770.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021197.mm.1 | TC0700002413.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700021197.mm.1 | NM_001113330.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021197.mm.1 | NM_001113330.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021197.mm.1 | NM_007770.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021197.mm.1 | NM_007770.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021195.mm.1 | TC0700002413.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700021195.mm.1 | NM_001113330.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021195.mm.1 | NM_001113330.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021195.mm.1 | NM_007770.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021195.mm.1 | NM_007770.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021198.mm.1 | TC0700002413.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700021198.mm.1 | NM_001113330.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021198.mm.1 | NM_001113330.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021198.mm.1 | NM_007770.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021198.mm.1 | NM_007770.4 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021199.mm.1 | TC0700002413.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700021199.mm.1 | NM_001113330.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021199.mm.1 | NM_001113330.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021199.mm.1 | NM_007770.4.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700021199.mm.1 | NM_007770.4 | Refseq |
| Mouse Expression Set 430 | 1449185_at | - | - |
| Mouse Expression Set 430 | 1418705_at | - | - |
| Mouse Expression Set 430 | 1449185_PM_at | - | - |
| Mouse Expression Set 430 | 1418705_PM_at | - | - |
| Murine Genome U74v2 Set | 99900_PM_at | - | - |
| Murine Genome U74v2 Set | 99900_at | - | - |
| Mouse Genome 430A 2.0 Array | 1418705_at | - | - |
| Mouse Genome 430A 2.0 Array | 1449185_at | - | - |
| Mouse Genome 430A 2.0 Array | 1418705_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1449185_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1418705_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1418705_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1449185_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1449185_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 364473 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 6520397 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 6520397 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0006520397 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_1247683 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1247683 | - | - |
| mouse-6 v1.1 (Illumina) | scl31734.6_85-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 6520397 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl31734.6_85-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 6520397 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_1247683 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_1247683 | - | - |
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