Assay Details

Gene Symbol: Rara
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001177302.1	NP_001170773.1	3	594		97
	NM_001177303.1	NP_001170774.1	2	339		97
	NM_009024.2	NP_033050.2	2	461		97
GenBank mRNA	AK042163.1	-	2	340		97
	AK154623.1	-	2	434		97
	BC010216.1	-	2	459	3498142	97
	BC040383.1	-	3	594		97
	S56656.1	-	2	441		97
	X56572.1	-	2	482		97

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100001587.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK042163.1, AK154623.1, BC010216.1, NM_001177302.1, NM_001177303.1, NM_009024.2, S56656.1, X56572.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rara

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100014848.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014848.mm.1	NM_001177302.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014848.mm.1	NM_001177302.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_001177302.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_001177302.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_001177303.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_001177303.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_009024.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014851.mm.1	NM_009024.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014844.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014844.mm.1	NM_001177302.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014844.mm.1	NM_001177302.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014844.mm.1	NM_009024.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014844.mm.1	NM_009024.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_001177302.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_001177302.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_001177303.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_001177303.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_009024.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014849.mm.1	NM_009024.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_001177302.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_001177302.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_001177303.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_001177303.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_009024.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014850.mm.1	NM_009024.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014847.mm.1	TC1100001587.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100014847.mm.1	NM_001177303.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100014847.mm.1	NM_001177303.1	Refseq

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Catalog #	4351372
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Genomic Map